Cre03.g144727.t1.1 RHOMBOID-like protein 14

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g144727.t1.1 chromosome_3 RHOMBOID-like protein 14 CDS 338126 341525 - 3 399

Phytozome

Locus Genomic View Functional Annotation
Cre03.g144727.t1.1 Cre03.g144727.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RBL2 g2900.t1, Cre01.g057600.t1.1, Cre01.g057600.t1.2 Not available 30787532 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0043
motif_0043_1

motif_0043_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000005
Motif Bicluster: 
bicluster_0043
Width: 
24
Number of Sites: 
1
Consensus: 
AcaCAcaCAcacaCaCAcAtaaAc
motif_0043_2

motif_0043_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000026
Motif Bicluster: 
bicluster_0043
Width: 
20
Number of Sites: 
1
Consensus: 
GGAGgtGggGgAgGanGgGG
 0.19
bicluster_0113
motif_0113_1

motif_0113_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000016
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
GnTtaTGTTGtTGtT
motif_0113_2

motif_0113_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000001
Motif Bicluster: 
bicluster_0113
Width: 
15
Number of Sites: 
1
Consensus: 
cTGCTGcTaCTGCTG
 0.26

GO Terms

GO:0004252 GO:0016021 -

serine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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