Cre03.g160953.t1.2 ribonuclease 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g160953.t1.2 chromosome_3 ribonuclease 2 CDS 2643042 2656377 - 13 335

Phytozome

Locus Genomic View Functional Annotation
Cre03.g160953.t1.2 Cre03.g160953.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g3298.t1, Cre03.g160953.t1.1 Not available 30787463 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0117
motif_0117_1

motif_0117_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00015
Motif Bicluster: 
bicluster_0117
Width: 
15
Number of Sites: 
1
Consensus: 
CtCCaCCAcCtCCaC
motif_0117_2

motif_0117_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.2
Motif Bicluster: 
bicluster_0117
Width: 
24
Number of Sites: 
1
Consensus: 
TGTGTGTtAagnAtCAntagnAaA
 0.14
bicluster_0184
motif_0184_1

motif_0184_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000032
Motif Bicluster: 
bicluster_0184
Width: 
21
Number of Sites: 
1
Consensus: 
TgaactattcaTgaATGTaat
motif_0184_2

motif_0184_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.45
Motif Bicluster: 
bicluster_0184
Width: 
21
Number of Sites: 
1
Consensus: 
ATAAAtATgtAagTcATgaAa
 0.14

GO Terms

GO:0003723 GO:0033897 GO:0005524 GO:0042626 GO:0006810 GO:0055085 GO:0016021 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

ribonuclease T2 activity

GO Category: 
molecular_function
Details: 
Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATPase activity, coupled to transmembrane movement of substances

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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