Cre03.g185250.t1.2 starch synthase 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g185250.t1.2 chromosome_3 starch synthase 2 CDS 5444965 5450972 - 6 007

Phytozome

Locus Genomic View Functional Annotation
Cre03.g185250.t1.2 Cre03.g185250.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g3839.t1, Cre03.g185250.t1.1 JGI183277 30787630 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0003
motif_0003_1

motif_0003_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.5e-34
Motif Bicluster: 
bicluster_0003
Width: 
21
Number of Sites: 
1
Consensus: 
GCTGctGCtgcTGCTGctGCT
motif_0003_2

motif_0003_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0003
Width: 
0
Number of Sites: 
1
 0.20
bicluster_0018
motif_0018_1

motif_0018_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000003
Motif Bicluster: 
bicluster_0018
Width: 
21
Number of Sites: 
1
Consensus: 
CGCCGCtGcCGCtGCcGCtGC
motif_0018_2

motif_0018_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0018
Width: 
0
Number of Sites: 
1
 0.18

GO Terms

GO:0009058 -

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI183277

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