Cre04.g216950.t1.2 3-ketoacyl-acyl carrier protein synthase III

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g216950.t1.2 chromosome_4 3-ketoacyl-acyl carrier protein synthase III CDS 163403 169278 + 5 875

Phytozome

Locus Genomic View Functional Annotation
Cre04.g216950.t1.2 Cre04.g216950.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g4515.t1, Cre04.g216950.t1.1 JGI343824 30791398 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0065
motif_0065_1

motif_0065_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2
Motif Bicluster: 
bicluster_0065
Width: 
20
Number of Sites: 
1
Consensus: 
gGAnGcGGnGGCGgcGgcgG
motif_0065_2

motif_0065_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
82
Motif Bicluster: 
bicluster_0065
Width: 
15
Number of Sites: 
1
Consensus: 
GTgAGTGcATtTGCA
 0.14
bicluster_0079
motif_0079_1

motif_0079_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0018
Motif Bicluster: 
bicluster_0079
Width: 
21
Number of Sites: 
1
Consensus: 
AagcTnTatgTAttTaTgaAA
motif_0079_2

motif_0079_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00028
Motif Bicluster: 
bicluster_0079
Width: 
21
Number of Sites: 
1
Consensus: 
gCtGCcGCtaCTGctGCcaCC
 0.19

GO Terms

GO:0016747 GO:0008610 GO:0004315 GO:0006633 -

transferase activity, transferring acyl groups other than amino-acyl groups

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).

lipid biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

3-oxoacyl-[acyl-carrier-protein] synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein].

fatty acid biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI343824

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