Cre06.g261700.t1.2 Ribosomal protein L10 family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g261700.t1.2 chromosome_6 Ribosomal protein L10 family protein CDS 1726350 1730016 + 3 666

Phytozome

Locus Genomic View Functional Annotation
Cre06.g261700.t1.2 Cre06.g261700.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g5881.t1, Cre06.g261700.t1.1 JGI401877 30779803 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0131
motif_0131_1

motif_0131_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3600
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
taTtTAtATtACaAt
motif_0131_2

motif_0131_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0131
Width: 
15
Number of Sites: 
1
Consensus: 
ACATTgcAaTgCtTA
 0.12
bicluster_0140
motif_0140_1

motif_0140_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
25
Motif Bicluster: 
bicluster_0140
Width: 
21
Number of Sites: 
1
Consensus: 
AataaCcaAnttTAtTGTaaT
motif_0140_2

motif_0140_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
15
Motif Bicluster: 
bicluster_0140
Width: 
15
Number of Sites: 
1
Consensus: 
tTGGTgTGctTgTTg
 0.11

GO Terms

GO:0042254 GO:0005622 -

ribosome biogenesis

GO Category: 
biological_process
Details: 
A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.

intracellular

GO Category: 
cellular_component
Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI401877

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