Cre06.g303050.t1.2 cytochrome B5 isoform D

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g303050.t1.2 chromosome_6 cytochrome B5 isoform D CDS 7856457 7858214 + 1 757

Phytozome

Locus Genomic View Functional Annotation
Cre06.g303050.t1.2 Cre06.g303050.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NIT3 g7015.t1, Cre06.g303050.t1.1 JGI188890 30779556 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0124
motif_0124_1

motif_0124_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.5e-32
Motif Bicluster: 
bicluster_0124
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCGCCGcCGCcGCcGCCGCCGC
motif_0124_2

motif_0124_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.3e-25
Motif Bicluster: 
bicluster_0124
Width: 
24
Number of Sites: 
1
Consensus: 
acacaCACacaCACanAcaCaCAC
 0.27
bicluster_0196
motif_0196_1

motif_0196_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-19
Motif Bicluster: 
bicluster_0196
Width: 
21
Number of Sites: 
1
Consensus: 
tGCtgCTgCTGCtgctGCTGC
motif_0196_2

motif_0196_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0196
Width: 
13
Number of Sites: 
1
Consensus: 
CACACAtgCacAC
 0.28

GO Terms

GO:0020037 -

heme binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI188890

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