Cre09.g387875.t1.1 pyrophosphorylase 4

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g387875.t1.1 chromosome_9 pyrophosphorylase 4 CDS 3253979 3256301 + 2 322

Phytozome

Locus Genomic View Functional Annotation
Cre09.g387875.t1.1 Cre09.g387875.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
IPY3 g9598.t1, Cre02.g122450.t1.1, Cre02.g122450.t1.2 Not available 30781201 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0088
motif_0088_1

motif_0088_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0015
Motif Bicluster: 
bicluster_0088
Width: 
23
Number of Sites: 
1
Consensus: 
CgCCagCaccgCCgCcgCCgcCa
motif_0088_2

motif_0088_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.7
Motif Bicluster: 
bicluster_0088
Width: 
15
Number of Sites: 
1
Consensus: 
TgtgatTgTaTTTna
 0.15
bicluster_0182
motif_0182_1

motif_0182_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
12
Motif Bicluster: 
bicluster_0182
Width: 
24
Number of Sites: 
1
Consensus: 
cagtataTatattttAtntGTaAa
motif_0182_2

motif_0182_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00012
Motif Bicluster: 
bicluster_0182
Width: 
15
Number of Sites: 
1
Consensus: 
TgCaTGTGTGtaTgT
 0.17

GO Terms

GO:0000287 GO:0004427 GO:0006796 GO:0005737 -

magnesium ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with magnesium (Mg) ions.

inorganic diphosphatase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate.

phosphate-containing compound metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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