Cre09.g394550.t1.2 Phosphoribosyltransferase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g394550.t1.2 chromosome_9 Phosphoribosyltransferase family protein CDS 1996927 2000917 - 3 990

Phytozome

Locus Genomic View Functional Annotation
Cre09.g394550.t1.2 Cre09.g394550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g9399.t1, Cre09.g394550.t1.1 JGI184171 30780870 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0083
motif_0083_1

motif_0083_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0083
Width: 
24
Number of Sites: 
1
Consensus: 
CtcCgcCtCCAcCacCgCCtgCAG
motif_0083_2

motif_0083_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0083
Width: 
15
Number of Sites: 
1
Consensus: 
tttAAAatTcTaCaa
 0.18
bicluster_0145
motif_0145_1

motif_0145_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00059
Motif Bicluster: 
bicluster_0145
Width: 
24
Number of Sites: 
1
Consensus: 
CAgCAgcgcCaGCAgCcaaAaCac
motif_0145_2

motif_0145_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
180
Motif Bicluster: 
bicluster_0145
Width: 
11
Number of Sites: 
1
Consensus: 
aAGAAGAaaAA
 0.14

GO Terms

GO:0009116 -

nucleoside metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI184171

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