Cre09.g410850.t1.2 nitrate transporter2.5

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g410850.t1.2 chromosome_9 nitrate transporter2.5 CDS 6991287 6995219 - 3 932

Phytozome

Locus Genomic View Functional Annotation
Cre09.g410850.t1.2 Cre09.g410850.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NAR3, NRT2.1 g10176.t1, Cre09.g410850.t1.1 JGI345325 30780328 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0116
motif_0116_1

motif_0116_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000082
Motif Bicluster: 
bicluster_0116
Width: 
20
Number of Sites: 
1
Consensus: 
CAGCgnCAGCGGCagcgGCa
motif_0116_2

motif_0116_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0116
Width: 
15
Number of Sites: 
1
Consensus: 
TGgttGTGTgggTGT
 0.10
bicluster_0150
motif_0150_1

motif_0150_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.29
Motif Bicluster: 
bicluster_0150
Width: 
15
Number of Sites: 
1
Consensus: 
gCATgcanACaTGCA
motif_0150_2

motif_0150_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
44
Motif Bicluster: 
bicluster_0150
Width: 
15
Number of Sites: 
1
Consensus: 
tTttAttgTgTcTgT
 0.11

GO Terms

GO:0055085 GO:0016021 -

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI345325

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