Cre12.g485800.t1.2 FtsH extracellular protease family

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g485800.t1.2 chromosome_12 FtsH extracellular protease family CDS 1683525 1688680 - 5 155

Phytozome

Locus Genomic View Functional Annotation
Cre12.g485800.t1.2 Cre12.g485800.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
FHL1 g12281.t1, Cre12.g485800.t1.1 JGI55270 30791981 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0072
motif_0072_1

motif_0072_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0072
Width: 
24
Number of Sites: 
1
Consensus: 
GcGGAGGcGGaGGtgGAGGcgGcG
motif_0072_2

motif_0072_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.4
Motif Bicluster: 
bicluster_0072
Width: 
22
Number of Sites: 
1
Consensus: 
gCCtcCaCCcTCtnCaCCAcCa
 0.14
bicluster_0134
motif_0134_1

motif_0134_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
450000
Motif Bicluster: 
bicluster_0134
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA
motif_0134_2

motif_0134_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
660
Motif Bicluster: 
bicluster_0134
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
 0.11

GO Terms

GO:0005524 GO:0004222 GO:0006508 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

metalloendopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI55270

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