Cre12.g489700.t1.2 ornithine carbamoyltransferase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g489700.t1.2 chromosome_12 ornithine carbamoyltransferase CDS 1195026 1198519 - 3 493

Phytozome

Locus Genomic View Functional Annotation
Cre12.g489700.t1.2 Cre12.g489700.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
OTC1 g12191.t1, Cre12.g489700.t1.1 JGI188762 30792674 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0030
motif_0030_1

motif_0030_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00028
Motif Bicluster: 
bicluster_0030
Width: 
21
Number of Sites: 
1
Consensus: 
AatTGtAtTtacAnnnaCatT
motif_0030_2

motif_0030_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0030
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0073
motif_0073_1

motif_0073_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
42
Motif Bicluster: 
bicluster_0073
Width: 
21
Number of Sites: 
1
Consensus: 
tatgTtcTaTTaCTtTncatT
motif_0073_2

motif_0073_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.4
Motif Bicluster: 
bicluster_0073
Width: 
21
Number of Sites: 
1
Consensus: 
gCtGcTGCcgCtGCTGcCGCC
 0.14

GO Terms

GO:0016597 GO:0016743 GO:0006520 -

amino acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.

carboxyl- or carbamoyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).

cellular amino acid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI188762

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