Cre12.g530550.t1.1 sphingosine kinase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g530550.t1.1 chromosome_12 sphingosine kinase 1 CDS 5453996 5458647 + 4 651

Phytozome

Locus Genomic View Functional Annotation
Cre12.g530550.t1.1 Cre12.g530550.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
KDG2 g13059.t1 JGI147241 30793346 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0075
motif_0075_1

motif_0075_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.7e-16
Motif Bicluster: 
bicluster_0075
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC
motif_0075_2

motif_0075_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000095
Motif Bicluster: 
bicluster_0075
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
 0.23
bicluster_0110
motif_0110_1

motif_0110_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.5e-27
Motif Bicluster: 
bicluster_0110
Width: 
15
Number of Sites: 
1
Consensus: 
tGCTGCTGCtGCtGc
motif_0110_2

motif_0110_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0110
Width: 
24
Number of Sites: 
1
Consensus: 
CCacCGCCgCCGCCgctgcCgcCG
 0.25

GO Terms

GO:0004143 GO:0007205 -

diacylglycerol kinase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol-3-phosphate.

protein kinase C-activating G-protein coupled receptor signaling pathway

GO Category: 
biological_process
Details: 
The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, where the pathway proceeds with activation of protein kinase C (PKC). PKC is activated by second messengers including diacylglycerol (DAG).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI147241

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