Cre12.g551200.t1.2 Carbohydrate-binding-like fold

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g551200.t1.2 chromosome_12 Carbohydrate-binding-like fold CDS 8144104 8150601 + 6 497

Phytozome

Locus Genomic View Functional Annotation
Cre12.g551200.t1.2 Cre12.g551200.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g13521.t1, Cre12.g551200.t1.1 Not available 30792622 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0093
motif_0093_1

motif_0093_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.28
Motif Bicluster: 
bicluster_0093
Width: 
21
Number of Sites: 
1
Consensus: 
cagcAccTGcAgaagCAGcAg
motif_0093_2

motif_0093_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
440
Motif Bicluster: 
bicluster_0093
Width: 
22
Number of Sites: 
1
Consensus: 
TGaACTgCgTcAgaAtGTccCT
 0.21
bicluster_0200
motif_0200_1

motif_0200_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.061
Motif Bicluster: 
bicluster_0200
Width: 
24
Number of Sites: 
1
Consensus: 
TttnnatAnaAcAtttngataCAt
motif_0200_2

motif_0200_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0200
Width: 
21
Number of Sites: 
1
Consensus: 
TCAaCatgAnnAtAGgAAACT
 0.29

GO Terms

GO:2001070 -

starch binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with starch.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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