Cre13.g573900.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g573900.t1.2 chromosome_13 CDS 1650853 1655431 + 4 578

Phytozome

Locus Genomic View Functional Annotation
Cre13.g573900.t1.2 Cre13.g573900.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NSS3 g14108.t1, Cre13.g573900.t1.1 JGI380696 30784337 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0147
motif_0147_1

motif_0147_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-19
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
TGCgTgTgtGtgTGTgTgTGTgtG
motif_0147_2

motif_0147_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000042
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
GGtGGcGGtGGcGGtGGCGGtGGc
 0.18
bicluster_0171
motif_0171_1

motif_0171_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1500
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
CAnACTtgTAnTtcAaTnAAT
motif_0171_2

motif_0171_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2900
Motif Bicluster: 
bicluster_0171
Width: 
21
Number of Sites: 
1
Consensus: 
aGAgAAcAaaAtctAAgngAA
 0.17

GO Terms

GO:0005215 GO:0006810 GO:0055085 GO:0016020 -

transporter activity

GO Category: 
molecular_function
Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI380696

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