Cre14.g624350.t1.2 gamma-tocopherol methyltransferase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre14.g624350.t1.2 chromosome_14 gamma-tocopherol methyltransferase CDS 2387611 2392380 - 4 769

Phytozome

Locus Genomic View Functional Annotation
Cre14.g624350.t1.2 Cre14.g624350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
VTE6 g15042.t1, Cre14.g624350.t1.1 JGI317639 30776413 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0046
motif_0046_1

motif_0046_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000039
Motif Bicluster: 
bicluster_0046
Width: 
21
Number of Sites: 
1
Consensus: 
CAgCAGcGgCtGCAGCAGCnG
motif_0046_2

motif_0046_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.088
Motif Bicluster: 
bicluster_0046
Width: 
21
Number of Sites: 
1
Consensus: 
tGGTggtGGcGGcGGcgGcGG
 0.22
bicluster_0167
motif_0167_1

motif_0167_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000042
Motif Bicluster: 
bicluster_0167
Width: 
15
Number of Sites: 
1
Consensus: 
CAGCAgCgcCGnCAG
motif_0167_2

motif_0167_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00021
Motif Bicluster: 
bicluster_0167
Width: 
21
Number of Sites: 
1
Consensus: 
GCAGcAGcaGgAGcngcaccG
 0.21

GO Terms

GO:0008168 GO:0008152 -

methyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a methyl group to an acceptor molecule.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI317639

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