Cre15.g636896.t1.1 Aldolase-type TIM barrel family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre15.g636896.t1.1 chromosome_15 Aldolase-type TIM barrel family protein CDS 505525 514872 - 9 347

Phytozome

Locus Genomic View Functional Annotation
Cre15.g636896.t1.1 Cre15.g636896.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g15361.t1 Not available 30783536 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0106
motif_0106_1

motif_0106_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0013
Motif Bicluster: 
bicluster_0106
Width: 
24
Number of Sites: 
1
Consensus: 
TGcTGctGGcGcTGctGcTgnTgc
motif_0106_2

motif_0106_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.01
Motif Bicluster: 
bicluster_0106
Width: 
24
Number of Sites: 
1
Consensus: 
aATnAnttAcntcAaaatATnaac
 0.21
bicluster_0118
motif_0118_1

motif_0118_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0051
Motif Bicluster: 
bicluster_0118
Width: 
20
Number of Sites: 
1
Consensus: 
CtgCTGctGcTgCCGcTGct
motif_0118_2

motif_0118_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.21
Motif Bicluster: 
bicluster_0118
Width: 
15
Number of Sites: 
1
Consensus: 
cAAcaaAttGcAACA
 0.17

GO Terms

GO:0017150 GO:0050660 GO:0008033 GO:0055114 -

tRNA dihydrouridine synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor.

flavin adenine dinucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.

tRNA processing

GO Category: 
biological_process
Details: 
The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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