Cre16.g650100.t1.2 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem IIs

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g650100.t1.2 chromosome_16 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem IIs CDS 1133646 1135236 + 1 590

Phytozome

Locus Genomic View Functional Annotation
Cre16.g650100.t1.2 Cre16.g650100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g15729.t1, Cre16.g650100.t1.1 JGI177155 30778201 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0087
motif_0087_1

motif_0087_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
22
Motif Bicluster: 
bicluster_0087
Width: 
24
Number of Sites: 
1
Consensus: 
CCttCaCctCCGCCgCCtCCgCct
motif_0087_2

motif_0087_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2700
Motif Bicluster: 
bicluster_0087
Width: 
15
Number of Sites: 
1
Consensus: 
GCAGCAGCAGCAGcA
 0.12
bicluster_0102
motif_0102_1

motif_0102_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0037
Motif Bicluster: 
bicluster_0102
Width: 
21
Number of Sites: 
1
Consensus: 
CAgatgncaAAcAnaTngcAA
motif_0102_2

motif_0102_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.7
Motif Bicluster: 
bicluster_0102
Width: 
24
Number of Sites: 
1
Consensus: 
GccGGaGGnGGaGGcGGaGgnGGC
 0.09

GO Terms

GO:0045158 GO:0017004 GO:0009512 -

electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity

GO Category: 
molecular_function
Details: 
Enables the directed movement of electrons within the cytochrome b6/f complex of photosystem II.

cytochrome complex assembly

GO Category: 
biological_process
Details: 
The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.

cytochrome b6f complex

GO Category: 
cellular_component
Details: 
Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI177155

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