Cre16.g673617.t1.1 Peptide chain release factor 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g673617.t1.1 chromosome_16 Peptide chain release factor 1 CDS 6761462 6765207 - 3 745

Phytozome

Locus Genomic View Functional Annotation
Cre16.g673617.t1.1 Cre16.g673617.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PRF1 g16713.t1, Cre01.g065550.t1.1, Cre01.g065550.t1.2 Not available 30777090 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0023
motif_0023_1

motif_0023_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000034
Motif Bicluster: 
bicluster_0023
Width: 
21
Number of Sites: 
1
Consensus: 
gAGCTgcgGaAGgAGCAGcAG
motif_0023_2

motif_0023_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000021
Motif Bicluster: 
bicluster_0023
Width: 
24
Number of Sites: 
1
Consensus: 
TaTcTTaAtgtcTccaGAnantAA
 0.10
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18

GO Terms

GO:0003747 GO:0006415 GO:0016149 GO:0005737 -

translation release factor activity

GO Category: 
molecular_function
Details: 
Involved in catalyzing the release of a nascent polypeptide chain from a ribosome.

translational termination

GO Category: 
biological_process
Details: 
The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).

translation release factor activity, codon specific

GO Category: 
molecular_function
Details: 
A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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