Cre16.g685650.t1.1 glutamate receptor 3.6

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g685650.t1.1 chromosome_16 glutamate receptor 3.6 CDS 4905841 4915199 - 9 358

Phytozome

Locus Genomic View Functional Annotation
Cre16.g685650.t1.1 Cre16.g685650.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
GLR1 g16383.t1 Not available 30778215 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0082
motif_0082_1

motif_0082_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000043
Motif Bicluster: 
bicluster_0082
Width: 
19
Number of Sites: 
1
Consensus: 
CgTgATAAcgTgtAcaTaT
motif_0082_2

motif_0082_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
63
Motif Bicluster: 
bicluster_0082
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACAaGCagAactAGgGGcCAc
 0.23
bicluster_0129
motif_0129_1

motif_0129_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.011
Motif Bicluster: 
bicluster_0129
Width: 
15
Number of Sites: 
1
Consensus: 
TTGtTTgTGcTgTtt
motif_0129_2

motif_0129_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.019
Motif Bicluster: 
bicluster_0129
Width: 
24
Number of Sites: 
1
Consensus: 
AcgagGnaCATAtgTGCAnatTAT
 0.18

GO Terms

GO:0004970 GO:0005234 GO:0016020 GO:0005215 GO:0006810 -

ionotropic glutamate receptor activity

GO Category: 
molecular_function
Details: 
Catalysis of the transmembrane transfer of an ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.

extracellular-glutamate-gated ion channel activity

GO Category: 
molecular_function
Details: 
Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

transporter activity

GO Category: 
molecular_function
Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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