Cre16.g689050.t1.1 acyl-CoA oxidase 5

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g689050.t1.1 chromosome_16 acyl-CoA oxidase 5 CDS 3731914 3740006 - 8 092

Phytozome

Locus Genomic View Functional Annotation
Cre16.g689050.t1.1 Cre16.g689050.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ACO1 g16176.t1 JGI395830 30777517 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0018
motif_0018_1

motif_0018_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000003
Motif Bicluster: 
bicluster_0018
Width: 
21
Number of Sites: 
1
Consensus: 
CGCCGCtGcCGCtGCcGCtGC
motif_0018_2

motif_0018_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0018
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0153
motif_0153_1

motif_0153_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000012
Motif Bicluster: 
bicluster_0153
Width: 
15
Number of Sites: 
1
Consensus: 
ACaCaCAnACACaCA
motif_0153_2

motif_0153_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
150
Motif Bicluster: 
bicluster_0153
Width: 
24
Number of Sites: 
1
Consensus: 
AACAAAGaaTcacctcagaCAtcA
 0.19

GO Terms

GO:0003997 GO:0006635 GO:0055114 GO:0005777 GO:0003995 -

acyl-CoA oxidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide.

fatty acid beta-oxidation

GO Category: 
biological_process
Details: 
A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

peroxisome

GO Category: 
cellular_component
Details: 
A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.

acyl-CoA dehydrogenase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI395830

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