Cre17.g699100.t1.1 Patatin-like phospholipase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g699100.t1.1 chromosome_17 Patatin-like phospholipase family protein CDS 462488 470185 + 7 697

Phytozome

Locus Genomic View Functional Annotation
Cre17.g699100.t1.1 Cre17.g699100.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
TGL20 g16956.t1 JGI319684 30781652 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0177
motif_0177_1

motif_0177_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.015
Motif Bicluster: 
bicluster_0177
Width: 
15
Number of Sites: 
1
Consensus: 
TCAtgcacaCaTGCa
motif_0177_2

motif_0177_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0177
Width: 
24
Number of Sites: 
1
Consensus: 
CtCCcnCtctcCctcCgCnCacCc
 0.22
bicluster_0213
motif_0213_1

motif_0213_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
55000
Motif Bicluster: 
bicluster_0213
Width: 
11
Number of Sites: 
1
Consensus: 
CtCAtatgTTa
motif_0213_2

motif_0213_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
230
Motif Bicluster: 
bicluster_0213
Width: 
24
Number of Sites: 
1
Consensus: 
GcAGCaGcgGggGCgGgAGtGGcg
 0.20

GO Terms

GO:0006629 -

lipid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI319684

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