Cre17.g705450.t1.2 U-box domain-containing protein kinase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g705450.t1.2 chromosome_17 U-box domain-containing protein kinase family protein CDS 1270499 1274026 + 3 527

Phytozome

Locus Genomic View Functional Annotation
Cre17.g705450.t1.2 Cre17.g705450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17098.t1, Cre17.g705450.t1.1 JGI189052 30782083 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0112
motif_0112_1

motif_0112_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.6e-25
Motif Bicluster: 
bicluster_0112
Width: 
24
Number of Sites: 
1
Consensus: 
GCAGcgGCAGtgGCAGcnGCgGca
motif_0112_2

motif_0112_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000016
Motif Bicluster: 
bicluster_0112
Width: 
24
Number of Sites: 
1
Consensus: 
gTgcGTGcgTGTGTGTgTgtGTGt
 0.22
bicluster_0147
motif_0147_1

motif_0147_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.2e-19
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
TGCgTgTgtGtgTGTgTgTGTgtG
motif_0147_2

motif_0147_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000042
Motif Bicluster: 
bicluster_0147
Width: 
24
Number of Sites: 
1
Consensus: 
GGtGGcGGtGGcGGtGGCGGtGGc
 0.18

GO Terms

GO:0004842 GO:0016567 GO:0000151 -

ubiquitin-protein ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.

protein ubiquitination

GO Category: 
biological_process
Details: 
The process in which one or more ubiquitin groups are added to a protein.

ubiquitin ligase complex

GO Category: 
cellular_component
Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI189052

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