Cre17.g706450.t1.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g706450.t1.1 chromosome_17 CDS 1403505 1411220 - 7 715

Phytozome

Locus Genomic View Functional Annotation
Cre17.g706450.t1.1 Cre17.g706450.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17120.t1 Not available 30782064 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0001
motif_0001_1

motif_0001_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.9e-28
Motif Bicluster: 
bicluster_0001
Width: 
24
Number of Sites: 
1
Consensus: 
CAcCaCCagCaCCacCaCCacCaC
motif_0001_2

motif_0001_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0001
Width: 
0
Number of Sites: 
1
 0.02
bicluster_0075
motif_0075_1

motif_0075_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.7e-16
Motif Bicluster: 
bicluster_0075
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC
motif_0075_2

motif_0075_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000095
Motif Bicluster: 
bicluster_0075
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
 0.23

GO Terms

GO:0005230 GO:0006810 GO:0016020 -

extracellular ligand-gated ion channel activity

GO Category: 
molecular_function
Details: 
Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts.

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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