Cre17.g715350.t1.2 ARF-GAP domain 9

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g715350.t1.2 chromosome_17 ARF-GAP domain 9 CDS 2405728 2409285 - 3 557

Phytozome

Locus Genomic View Functional Annotation
Cre17.g715350.t1.2 Cre17.g715350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17317.t2, Cre17.g715350.t1.1 JGI410161 30781593 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0014
motif_0014_1

motif_0014_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000029
Motif Bicluster: 
bicluster_0014
Width: 
15
Number of Sites: 
1
Consensus: 
CAGCgcCAGCggCaG
motif_0014_2

motif_0014_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0014
Width: 
0
Number of Sites: 
1
 0.23
bicluster_0029
motif_0029_1

motif_0029_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0075
Motif Bicluster: 
bicluster_0029
Width: 
21
Number of Sites: 
1
Consensus: 
tTTTgTaAaTtTgtaTGTtTT
motif_0029_2

motif_0029_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
120
Motif Bicluster: 
bicluster_0029
Width: 
24
Number of Sites: 
1
Consensus: 
agttgCgGAaCTAacGcgtACGTa
 0.24

GO Terms

GO:0008060 GO:0008270 GO:0032312 -

ARF GTPase activator activity

GO Category: 
molecular_function
Details: 
Increases the rate of GTP hydrolysis by the GTPase ARF.

zinc ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.

regulation of ARF GTPase activity

GO Category: 
biological_process
Details: 
Any process that modulates the activity of the GTPase ARF.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI410161

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