Cre17.g726400.t1.1 LAG1 homologue 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g726400.t1.1 chromosome_17 LAG1 homologue 2 CDS 3637631 3640752 + 3 121

Phytozome

Locus Genomic View Functional Annotation
Cre17.g726400.t1.1 Cre17.g726400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17564.t1 JGI105088 30781925 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0026
motif_0026_1

motif_0026_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
58
Motif Bicluster: 
bicluster_0026
Width: 
15
Number of Sites: 
1
Consensus: 
ATTaTaTnagTTAct
motif_0026_2

motif_0026_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000035
Motif Bicluster: 
bicluster_0026
Width: 
24
Number of Sites: 
1
Consensus: 
GcGgcaGcgGCAGCaGcagCaGCa
 0.22
bicluster_0037
motif_0037_1

motif_0037_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000069
Motif Bicluster: 
bicluster_0037
Width: 
21
Number of Sites: 
1
Consensus: 
CncCGCCActGcCnCCgCCac
motif_0037_2

motif_0037_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.034
Motif Bicluster: 
bicluster_0037
Width: 
24
Number of Sites: 
1
Consensus: 
TTGGTTTAGTgTgGGcTGGTaTnT
 0.20

GO Terms

GO:0016021 -

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI105088

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