Cre17.g729800.t1.2 63 kDa inner membrane family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g729800.t1.2 chromosome_17 63 kDa inner membrane family protein CDS 4148216 4152755 + 4 539

Phytozome

Locus Genomic View Functional Annotation
Cre17.g729800.t1.2 Cre17.g729800.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17637.t1, Cre17.g729800.t1.1 JGI320722 30781893 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0070
motif_0070_1

motif_0070_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0070
Width: 
24
Number of Sites: 
1
Consensus: 
CGCCagCacCgCCtCCaCCtccaC
motif_0070_2

motif_0070_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
76
Motif Bicluster: 
bicluster_0070
Width: 
15
Number of Sites: 
1
Consensus: 
cAAnTGaanAanAaA
 0.14
bicluster_0072
motif_0072_1

motif_0072_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000002
Motif Bicluster: 
bicluster_0072
Width: 
24
Number of Sites: 
1
Consensus: 
GcGGAGGcGGaGGtgGAGGcgGcG
motif_0072_2

motif_0072_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.4
Motif Bicluster: 
bicluster_0072
Width: 
22
Number of Sites: 
1
Consensus: 
gCCtcCaCCcTCtnCaCCAcCa
 0.14

GO Terms

GO:0051205 GO:0016021 -

protein insertion into membrane

GO Category: 
biological_process
Details: 
The process that results in the incorporation of a protein into a biological membrane.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI320722

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