Module 9 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 1.2e-28 | 0.43 | 73 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.2e-28 | |
| Motif 2 |
 |
| e-value: 0.43 |
| MSMEG_5827 Glyoxalase family protein (Glyoxalase/bleomycin resistance protein/dioxygenase) | MSMEG_4430 ATP-dependent transcriptional regulator, MalT-like, LuxR family (Transcriptional regulator) |
| MSMEG_5617 FHA domain containing protein (Immunogenic protein MPT63) | MSMEG_3141 Conserved domain protein (Putative transcriptional regulatory protein) |
| MSMEG_5830 29 kDa antigen CFP29 (29 kDa antigen Cfp29) | MSMEG_0328 Uncharacterized protein |
| MSMEG_4018 Nucleotidyltransferase domain protein (Uncharacterized protein) | MSMEG_4147 Major facilitator superfamily protein MFS_1, putative |
| MSMEG_0451 Oxidoreductase, FAD-linked (Uncharacterized protein) | MSMEG_5829 Dyp-type peroxidase (EC 1.11.1.7) |
| MSMEG_6237 Uncharacterized protein | MSMEG_5828 Probable M18 family aminopeptidase 2 (EC 3.4.11.-) |
| MSMEG_1689 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) | MSMEG_6431 Uncharacterized protein |
| MSMEG_3191 Uncharacterized protein | MSMEG_3381 FMN-dependent NADH-azoreductase (EC 1.7.-.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase) |
| MSMEG_1680 Uncharacterized protein | MSMEG_3382 ArsR family transcriptional regulator (Transcriptional regulator, ArsR family protein) |
| MSMEG_3630 Transcriptional repressor, CopY family protein | MSMEG_0918 Transcriptional regulator, XRE family (Transcriptional regulator, XRE family protein) |
| MSMEG_3631 Integral membrane protein (Peptidase M48 Ste24p) | MSMEG_1986 Tartrate dehydrogenase (EC 1.1.1.93) |
| MSMEG_3632 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | MSMEG_2750 Iron-dependent repressor IdeR (Iron-dependent repressor ideR) |
| MSMEG_3634 IMP dehydrogenase family protein (Inosine-5-monophosphate dehydrogenase guaB1) (EC 1.1.1.-) | MSMEG_3629 Uncharacterized protein |
| MSMEG_3162 Beta-lactamase (Putative esterase/lipase/beta-lactamase) | MSMEG_4272 HesB/YadR/YfhF family protein (Iron-sulfur cluster assembly accessory protein) |
| MSMEG_2098 5-carboxymethyl-2-hydroxymuconate Delta-isomerase (EC 5.3.3.10) (Fumarylacetoacetate hydrolase family protein) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
Biological.replicate.5.of.6..negative.control
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
X3dbfcy5plogcy3slide601norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT_log.phase_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X4dbfcy5plogcy3slide480norm
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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