Module 10 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 0.000017 | 120 | 77 | 34 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000017 | |
| Motif 2 |
 |
| e-value: 120 |
| MSMEG_1887 Uncharacterized protein | MSMEG_3949 Uncharacterized protein |
| MSMEG_5751 Putative adhesin/hemolysin (Uncharacterized protein) | MSMEG_5501 Uncharacterized protein |
| MSMEG_6849 LysR-family protein transcriptional regulator (LysR-family transcriptional regulator) | MSMEG_5137 Respiratory nitrate reductase, gamma subunit (EC 1.7.99.4) |
| MSMEG_3134 Cytochrome P450 (Cytochrome P450 107B1) (EC 1.14.-.-) | MSMEG_5139 Nitrate reductase, beta subunit (EC 1.7.99.4) (Respiratory nitrate reductase (Beta chain) narH) |
| MSMEG_3687 AMP-dependent synthetase and ligase (EC 2.3.1.86) (Medium chain acyl-CoA synthetase) | MSMEG_5138 Nitrate reductase delta chain NarJ3 (EC 1.7.99.4) (Nitrate reductase molybdenum cofactor assembly chaperone) |
| MSMEG_5712 LysR-family protein transcriptional regulator (LysR-family transcriptional regulator) | MSMEG_3367 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) |
| MSMEG_6655 Uncharacterized protein | MSMEG_3439 Uncharacterized protein |
| MSMEG_5714 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) | MSMEG_4961 Uncharacterized protein |
| MSMEG_0353 Uncharacterized protein | MSMEG_4591 Uncharacterized protein |
| MSMEG_6011 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_5903 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_4857 Conserved domain protein (Ferredoxin) | MSMEG_5140 Nitrate reductase, alpha subunit (EC 1.7.99.4) |
| MSMEG_4856 Cytochrome P450 (Cytochrome P450 105Q4 Cyp105Q4) | MSMEG_5141 Nitrate/nitrite transporter protein |
| MSMEG_6312 Cytochrome P450 (EC 1.14.14.1) (Cytochrome P450 107B1) (EC 1.14.-.-) | MSMEG_1353 ABC1 family protein (Bbc-1) |
| MSMEG_6427 Superoxide dismutase [Mn] (EC 1.15.1.1) | MSMEG_1352 Hydrolase, alpha/beta fold family protein (Lipase/esterase lipG) |
| MSMEG_3947 6-phosphofructokinase isozyme 2 (EC 2.7.1.11) | MSMEG_1215 Serine/threonine-protein kinase PknE, putative (EC 2.7.11.1) |
| MSMEG_2843 Nitrilotriacetate monooxygenase (Nitrilotriacetate monooxygenase component A) (EC 1.14.13.-) | MSMEG_2446 Uncharacterized protein |
| MSMEG_0051 Transcription factor WhiB family protein | MSMEG_1176 PE-PPE, C-terminal domain protein (Uncharacterized protein) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Biological.replicate.4.of.6..negative.control
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.2.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep1
X3dbfcy5plogcy3slide601norm
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT_log.phase_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
Biological.replicate.2.of.7..falcarinol.treatment
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.6..isoniazid.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
X4XR.rep1
Slow.vs..Fast.Replicate.4
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
Wild.type.rep2.x
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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