Module 15 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.00000000000068 | 0.00000039 | 75 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.00000000000068 | |
| Motif 2 |
 |
| e-value: 0.00000039 |
| MSMEG_5469 Acetyltransferase, GNAT family protein | MSMEG_2199 Uncharacterized protein |
| MSMEG_3170 Conserved domain protein (RNA-binding S4) | MSMEG_6024 Acetoacetyl-CoA synthase (EC 6.2.1.16) |
| MSMEG_5732 Monooxygenase | MSMEG_5476 Glyoxylate carboligase (EC 4.1.1.47) |
| MSMEG_4379 Isochorismatase hydrolase | MSMEG_5477 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) |
| MSMEG_4079 Alpha/beta hydrolase fold protein (Putative hydrolase) | MSMEG_4747 Uncharacterized protein |
| MSMEG_4176 Uncharacterized protein | MSMEG_4748 Uncharacterized protein |
| MSMEG_5870 Sensor histidine kinase PhoR | MSMEG_6026 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) |
| MSMEG_5872 DNA-binding response regulator PhoP | MSMEG_2012 Histidinol dehydrogenase (HDH) (EC 1.1.1.23) |
| MSMEG_5873 Conserved membrane protein (Uncharacterized protein) | MSMEG_2011 Transcriptional regulator LacI family (EC 5.1.1.1) (Transcriptional regulator, LacI family protein) |
| MSMEG_1347 50S ribosomal protein L1 | MSMEG_6028 Transcriptional regulator, LysR family (Transcriptional regulator, LysR family protein) |
| MSMEG_0230 Uncharacterized protein | MSMEG_0224 O-methyltransferase (O-methyltransferase MdmC) (EC 2.1.1.-) |
| MSMEG_6027 Major facilitator superfamily protein MFS_1 | MSMEG_3834 Putative TetR-family protein transcriptional regulator (Transcriptional regulator, TetR family) |
| MSMEG_5158 Sensor histidine kinase (Two-component system sensor kinase) | MSMEG_0229 Dihydroxy-acid dehydratase (DAD) (EC 4.2.1.9) |
| MSMEG_5478 Hydroxypyruvate isomerase (EC 5.3.1.22) |
KO_stationary.phase_rep1
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.4.of.7..ethambutol.treatment
dosR.WT_Replicate3
KO_log.phase_rep2
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.6..kanamycin.treatment
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
X2.5..vs..50..air.saturation.Replicate.4
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
Biological.replicate.4.of.6..kanamycin.treatment
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.1.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Comments
Log in to post comments