Module 17 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Residual Motif 1 e-value Motif 2 e-value Conditions Genes version
0.57 0.000000000044 0.0000000075 77 34 20160204
Motif 1
e-value: 0.000000000044
e-value: 0.0000000075
MSMEG_1363 Glucokinase (EC 2.7.1.2) (Sugar kinase) MSMEG_0508 Glycerol-phosphate porter (Sugar ABC transporter ATP-binding protein)
MSMEG_5047 Drug resistance transporter Bcr/CflA subfamily protein MSMEG_5528 Uncharacterized protein
MSMEG_5048 Putative membrane protein (Uncharacterized protein) MSMEG_4349 Conserved hypothetical proline rich protein
MSMEG_0840 Uncharacterized protein MSMEG_4411 Oxidoreductase FAD-binding region
MSMEG_5774 tRNA-dihydrouridine synthase (EC 1.3.1.-) MSMEG_5545 DNA glycosylase (EC 4.2.99.18) (Formamidopyrimidine-DNA glycosylase)
MSMEG_0925 Uncharacterized protein MSMEG_4412 Molybdopterin binding oxidoreductase (EC 1.7.-.-) (Oxidoreductase, molybdopterin binding)
MSMEG_3374 Uncharacterized protein MSMEG_1733 Uncharacterized protein
MSMEG_4583 ATPase associated with various cellular activities MSMEG_1731 IS6120, transposase (Transposase, mutator type)
MSMEG_4582 Uncharacterized protein (VWA containing CoxE-like protein) MSMEG_4924 Adenylate cyclase (EC 4.6.1.1) (Adenylate cyclase, family protein 3)
MSMEG_2065 YceI like family (YceI like family protein) MSMEG_4281 Probable cytosol aminopeptidase (Leucine aminopeptidase) (Leucyl aminopeptidase)
MSMEG_0317 Uncharacterized protein MSMEG_4923 Endonuclease NucS (EC 3.1.-.-)
MSMEG_6253 Ferric uptake regulator, Fur family (EC 1.11.1.6) (Fur family protein transcriptional regulator) MSMEG_4922 Uncharacterized protein
MSMEG_2677 Conserved large membrane protein MSMEG_3083 Nucleoside-diphosphate sugar epimerase
MSMEG_0319 Acyltransferase MSMEG_3082 SOUL heme-binding protein (Soul heme-binding protein)
MSMEG_6214 GatB/Yqey (GatB/Yqey domain protein) MSMEG_5960 O-antigen polymerase, putative
MSMEG_0603 Acyl-CoA dehydrogenase FadE6 (Putative acyl-CoA dehydrogenase) MSMEG_0101 Uncharacterized protein
MSMEG_1229 DNA gyrase subunit B (EC 5.99.1.3) MSMEG_3764 Uncharacterized protein
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
KO_log.phase_rep2
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO..45min
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.7..falcarinol.treatment
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
dcpA.knockout.rep2
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
stphcy5plogcy3slide487norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
dosR.WT_Replicate3
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
Wild.type.rep2.x
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep1
Biological.replicate.1.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.4.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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