Module 18 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.000000000000016 | 0.00011 | 76 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000000016 | |
| Motif 2 |
 |
| e-value: 0.00011 |
| MSMEG_6635 Alpha subunit of malonate decarboxylase (Malonate decarboxylase alpha subunit) | MSMEG_3161 Uncharacterized protein |
| MSMEG_6634 Triphosphoribosyl-dephospho-CoA synthase (Triphosphoribosyl-dephospho-CoA synthase MdcB) (EC 2.4.2.52) | MSMEG_5051 Major facilitator superfamily MFS_1 (Major facilitator superfamily protein) |
| MSMEG_6736 LacI-family protein transcriptional regulator (LacI-family transcriptional regulator) | MSMEG_2803 Uncharacterized protein |
| MSMEG_6737 Putative membrane protein | MSMEG_5297 Oxalyl-CoA decarboxylase (EC 4.1.1.8) |
| MSMEG_0900 Aldehyde dehydrogenase (EC 1.2.1.3) (Eptc-inducible aldehyde dehydrogenase) (EC 1.2.1.3) | MSMEG_6664 Methylenetetrahydrofolate reductase (EC 1.5.1.20) |
| MSMEG_2048 Alcohol dehydrogenase (EC 1.1.1.1) | MSMEG_6663 C5-O-methyltransferase |
| MSMEG_5738 Uncharacterized protein (Zinc finger, UBP-type) | MSMEG_4163 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_1625 Amino acid permease-associated (Amino acid transporter, putative) | MSMEG_4164 3-hydroxybutyryl-CoA dehydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_0413 Uncharacterized protein | MSMEG_2201 MaoC-like dehydratase (EC 4.2.1.17) (ZbpA protein) |
| MSMEG_0443 Hydrolase, carbon-nitrogen family protein | MSMEG_0442 TetR family transcriptional regulator (Tetracyclin repressor, C-all-alpha domain protein) |
| MSMEG_0573 Putative ECF sigma factor RpoE1 | MSMEG_5682 Uncharacterized protein |
| MSMEG_5812 Carveol dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.275) | MSMEG_5681 Probable ferredoxin/ferredoxin--NADP reductase (EC 1.18.1.2) (Putative ferredoxin/ferredoxin--NADP reductase) |
| MSMEG_5811 Transcriptional regulator, TetR family protein | MSMEG_0575 MmpS1 protein |
| MSMEG_4456 Uncharacterized protein | MSMEG_3856 Transcriptional regulator, CadC |
| MSMEG_1228 Arylsulfatase A (EC 3.1.6.-) (Sulfatase) | MSMEG_2036 Hydrolase, alpha/beta fold family protein (Non-heme haloperoxidase Hpx) |
| MSMEG_3862 FxsA cytoplasmic membrane protein | MSMEG_3955 Uncharacterized protein |
| MSMEG_1227 Transcriptional regulator, GntR family protein |
Bedaquiline.vs..DMSO.30min
Biological.replicate.3.of.6..kanamycin.treatment
WT.vs..DamtR.without.N_rep2
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.4.of.6..kanamycin.treatment
DamtR.with.vs..DamtR.without.N_.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.1.of.6..kanamycin.treatment
stphcy3plogcy5slide581norm
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep2
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.5.of.6..negative.control
X3dbfcy5plogcy3slide601norm
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.2.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.vs..DglnR.N_starvation_rep2
Wild.type.rep2.x
X2XR.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Comments
Log in to post comments