Module 21 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.0000000074 | 0.0000002 | 83 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000074 | |
| Motif 2 |
 |
| e-value: 0.0000002 |
| MSMEG_4118 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Isovaleryl-CoA dehydrogenase) (EC 1.3.8.4) | MSMEG_0723 Uncharacterized protein |
| MSMEG_4119 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) (Enoyl-CoA hydratase) (EC 4.2.1.17) | MSMEG_2047 Probable enoyl-CoA hydratase (EC 4.2.1.17) |
| MSMEG_4111 Alpha-methylacyl-CoA racemase (L-carnitine dehydratase/bile acid-inducible protein F) (EC 5.1.99.4) | MSMEG_2844 ABC transporter ATP binding protein (ABC transporter, ATP-binding protein) |
| MSMEG_4112 Cyclohexanecarboxylate-CoA ligase | MSMEG_2845 ABC transporter permease protein (Binding-protein-dependent transport systems inner membrane component) |
| MSMEG_4113 Acyl-CoA dehydrogenase (Uncharacterized protein) | MSMEG_2846 ABC transporter permease protein (Binding-protein-dependent transport systems inner membrane component) |
| MSMEG_4114 1,4-Dihydroxy-2-naphthoate synthase (EC 4.1.3.36) (Naphthoate synthase) (EC 4.1.3.36) | MSMEG_2847 Bacterial extracellular solute-binding protein, family protein 5 |
| MSMEG_4115 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) (3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase) (EC 1.1.1.-) | MSMEG_6596 Uncharacterized protein |
| MSMEG_4116 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.-) (3-hydroxybutyryl-CoA dehydrogenase) (EC 1.1.1.157) | MSMEG_6597 Hydrolase of the alpha/beta superfamily protein (OsmC-like family protein) |
| MSMEG_4117 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) | MSMEG_4120 CAIB/BAIF family protein |
| MSMEG_2049 Putative transcriptional regulator, TetR family protein (Transcriptional regulator, TetR family) | MSMEG_2487 4-aminobutyrate aminotransferase (EC 2.6.1.19) (Aminotransferase) |
| MSMEG_0725 IS1137, transposase orfB | MSMEG_2488 [NADP+] succinate-semialdehyde dehydrogenase (EC 1.2.1.16) |
Wild.type.rep1.y
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.3.of.7..falcarinol.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.1.of.6..negative.control
Biological.replicate.3.of.6..isoniazid.treatment
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Biological.replicate.3.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Sub.MIC.INH
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
WT.vs..DamtR.N.surplus_rep2
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