Module 27 Residual: 0.53Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.53			74	7	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

Conditions

KO_stationary.phase_rep1

Bedaquiline.vs..DMSO.30min

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

WT.vs..DamtR.without.N_rep2

Mycobacterium.smegmatis.Spheroplast.induced

dosR.WT_Replicate4

dosR.WT_Replicate3

dosR.WT_Replicate2

dosR.WT_Replicate1

Biological.replicate.5.of.6..negative.control

KO_log.phase_rep2

KO_log.phase_rep1

Plogcy5plogcy3slide110norm

Wild.type.rep1.x

MB100pruR.vs..MB100.rep.4

MB100pruR.vs..MB100.rep.2

DglnR_without.vs..with.N_rep2

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

Wild.type.rep3

Bedaquiline.vs..DMSO..45min

DamtR.with.vs..DamtR.without.N_.rep1

DamtR.with.vs..DamtR.without.N_.rep2

X0.6..vs..50..air.saturation.Replicate.1

X0.6..vs..50..air.saturation.Replicate.4

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

mc2155.vs.Dcrp1.replicate.2

Plogcy5plogcy3slide113norm

mc2155.vs.Dcrp1.replicate.1

stphcy3plogcy5slide581norm

WT.vs..DamtR.N.surplus_rep2

X4dbfcy5plogcy3slide901norm

X4dbfcy5plogcy3slide480norm

Plogcy5plogcy3slide111norm

stphcy5plogcy3slide580norm

WT_log.phase_rep2

X2.5..vs..50..air.saturation.Replicate.5

X3dbfcy3plogcy5slide607norm

WT_log.phase_rep1

X3dbfcy5plogcy3slide603norm

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

X2.5..vs..50..air.saturation.Replicate.3

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

X4XR.rep2

stphcy5plogcy3slide487norm

Wild.type.rep2.x

Slow.vs..Fast.Replicate.5

Bedaquiline.vs..DMSO.60min

Biological.replicate.5.of.6..isoniazid.treatment

WT.vs..DglnR.N_starvation_dye.swap_rep1

Slow.vs..Fast.Replicate.2

Slow.vs..Fast.Replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

mc2155.pMind..vs.mc2155.pMind.6189.replicate.4

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

WT.vs..DamtR.N.surplus_.dyeswap_rep1

WT.vs..DglnR.N_starvation_rep1

Biological.replicate.1.of.7..panaxydol.treatment

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.vs..DglnR.N_starvation_rep2

DglnR_without.vs..with.N_dyeswap_rep2

X2XR.rep2

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

BatchCulture_LBTbroth_StationaryPhase_Replicate4

BatchCulture_LBTbroth_StationaryPhase_Replicate2

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..negative.control

X4dbfcy3plogcy5slide903norm

Bedaquiline.vs..DMSO.120min

Comments