Module 30 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 0.000015 | 0.0011 | 76 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000015 | |
| Motif 2 |
 |
| e-value: 0.0011 |
| MSMEG_4544 Methyltransferase small domain superfamily protein (Methyltransferase type 12) | MSMEG_6147 Uncharacterized protein |
| MSMEG_4448 Probable endoribonuclease MazF (EC 3.1.-.-) (Toxin MazF) | MSMEG_2788 ATP/GTP-binding integral membrane protein |
| MSMEG_5535 Uncharacterized protein | MSMEG_2783 Uncharacterized protein |
| MSMEG_6617 NUDIX hydrolase (Nudix hydrolase) | MSMEG_1836 Mannose-6-phosphate isomerase, class I (EC 5.3.1.8) |
| MSMEG_2545 Probable dual-specificity RNA methyltransferase RlmN (EC 2.1.1.192) (23S rRNA (adenine(2503)-C(2))-methyltransferase) (23S rRNA m2A2503 methyltransferase) (Ribosomal RNA large subunit methyltransferase N) (tRNA (adenine(37)-C(2))-methyltransferase) (tRNA m2A37 methyltransferase) | MSMEG_4585 Ribokinase (EC 2.7.1.15) (Ribokinase Rbsk) (EC 2.7.1.15) |
| MSMEG_3227 Pyruvate kinase (EC 2.7.1.40) | MSMEG_2787 Bifunctional enzyme riboflavin biosynthesis protein ribD : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (Putative riboflavin biosynthesis protein RibD) |
| MSMEG_6055 Uncharacterized protein | MSMEG_5964 Glycosyl transferase, group 1, putative |
| MSMEG_4584 Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) | MSMEG_5686 Transmembrane protein (Uncharacterized protein) |
| MSMEG_3192 Uncharacterized protein | MSMEG_1659 Multidrug resistance protein, SMR family protein (Small multidrug resistance protein) |
| MSMEG_6699 Uncharacterized protein | MSMEG_2644 Putative hydrolase (X-Pro dipeptidyl-peptidase-like protein) |
| MSMEG_1126 Uncharacterized protein | MSMEG_6776 Transcriptional regulator, LysR family protein |
| MSMEG_2777 Alpha/beta hydrolase fold (Alpha/beta hydrolase fold protein) | MSMEG_2877 Uncharacterized protein |
| MSMEG_6945 Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5) | MSMEG_2627 Uncharacterized protein |
| MSMEG_6944 Putative membrane protein insertion efficiency factor | MSMEG_2621 Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS) |
| MSMEG_6946 50S ribosomal protein L34 | MSMEG_2442 Ribonuclease HII (RNase HII) (EC 3.1.26.4) |
| MSMEG_6942 Membrane protein OxaA (Putative inner membrane protein translocase component YidC) |
KO_stationary.phase_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Wild.type.rep3
MB100pruR.vs..MB100.rep.2
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
mc2155.vs.Dcrp1.replicate.1
X3dbfcy3plogcy5slide607norm
X0.6..vs..50..air.saturation.Replicate.4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_dyeswap_rep1
Biological.replicate.2.of.6..negative.control
Sub.MIC.INH
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
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