Module 35 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 0.000000000057 | 0.0011 | 81 | 25 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000057 | |
| Motif 2 |
 |
| e-value: 0.0011 |
| MSMEG_1959 UPF0182 protein MSMEG_1959/MSMEI_1915 | MSMEG_0252 tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33) (tRNA (guanine(46)-N(7))-methyltransferase) (tRNA(m7G46)-methyltransferase) |
| MSMEG_6112 Uncharacterized protein | MSMEG_0251 Uncharacterized protein |
| MSMEG_6113 D-alanyl-D-alanine carboxypeptidase DacB1 (EC 3.4.16.4) (D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase) (EC 3.4.16.4) | MSMEG_0254 Uncharacterized protein |
| MSMEG_6111 tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase) | MSMEG_6563 Dihydrokaempferol 4-reductase (NAD-dependent epimerase/dehydratase) |
| MSMEG_6777 Enoyl-CoA hydratase (EC 4.2.1.17) (Probable enoyl-CoA hydratase) (EC 4.2.1.17) | MSMEG_1528 Cutinase (EC 3.1.1.74) |
| MSMEG_6114 Inorganic pyrophosphatase (EC 3.6.1.1) | MSMEG_1460 Ferredoxin reductase component of dioxygenase (EC 1.18.1.3) (Pyridine nucleotide-disulphide oxidoreductase) |
| MSMEG_6564 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_1463 Gamma-glutamyltransferase 1 Threonine peptidase MEROPS family T03 (EC 2.3.2.2) (Gamma-glutamyltranspeptidase) |
| MSMEG_2534 Putative carboxylesterase protein | MSMEG_1462 Ferredoxin (Rieske (2Fe-2S) region) (EC 1.-.-.-) |
| MSMEG_2535 Dehydrogenase/reductase SDR family protein member 10 (EC 1.1.-.-) | MSMEG_1461 5-oxovalerate dehydrogenase |
| MSMEG_2536 3-oxoacyl-[acyl-carrier-protein] reductase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_1529 Cutinase (EC 3.1.1.74) |
| MSMEG_1459 Rieske (2Fe-2S) region (EC 1.-.-.-) (Rieske [2Fe-2S] domain protein) | MSMEG_6562 Acyl-CoA dehydrogenase FadE6_1 (Putative acyl-CoA dehydrogenase) |
| MSMEG_2533 Uncharacterized protein | MSMEG_6560 Acyl dehydratase (Uncharacterized protein) |
| MSMEG_0253 Uncharacterized protein |
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep3
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
Biological.replicate.1.of.6..isoniazid.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.3.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
WT.vs..DglnR.N_starvation_dye.swap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
mc2155.vs.Dcrp1.replicate.4
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
DglnR_without.vs..with.N_rep1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Slow.vs..Fast.Replicate.4
Biological.replicate.6.of.6..kanamycin.treatment
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..falcarinol.treatment
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