Module 36 Residual: 0.55
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.55 | 4.1e-36 | 0.0000000000000023 | 85 | 27 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.1e-36 | |
| Motif 2 |
 |
| e-value: 0.0000000000000023 |
| MSMEG_6919 Proline rich secreted protein Mtc28 (Proline-rich 28 kDa antigen) | MSMEG_1008 Uncharacterized protein |
| MSMEG_2184 Amino acid permease (Amino acid permease-associated region) | MSMEG_2738 Biotin sulfoxide reductase (EC 1.-.-.-) (Biotin sulfoxide reductase bisC (Molybdopterin oxidoreductase)) (EC 1.7.2.3) |
| MSMEG_6917 Leucine--tRNA ligase (EC 6.1.1.4) (Leucyl-tRNA synthetase) (LeuRS) | MSMEG_2739 Conserved transmembrane alanine and glycine rich protein (Uncharacterized protein) |
| MSMEG_2183 Uncharacterized protein | MSMEG_3008 Putative sigma 54 type regulator |
| MSMEG_2899 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) | MSMEG_5505 Uncharacterized protein |
| MSMEG_1996 N5,N10-methylenetetrahydromethanopterin reductase-related protein | MSMEG_3007 Succinate-semialdehyde dehydrogenase |
| MSMEG_1801 Uncharacterized protein | MSMEG_3005 Hydroxyacyl-CoA dehydrogenase |
| MSMEG_4155 Transposase A | MSMEG_0549 ABC transporter, permease protein (Binding-protein-dependent transport systems inner membrane component) |
| MSMEG_1995 Transcriptional regulator MdcY family protein | MSMEG_2153 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_4157 Putative transposase (Tn554 transposase C) | MSMEG_2154 Uncharacterized protein |
| MSMEG_4156 Putative transposase | MSMEG_5875 Uncharacterized protein |
| MSMEG_0550 Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein (Sulfonate binding protein) | MSMEG_2587 Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M) |
| MSMEG_0551 ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit (ABC transporter ATP-binding protein) | MSMEG_2586 Uncharacterized protein |
| MSMEG_0552 OsmC-like protein (Uncharacterized protein) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
dcpA.knockout.rep2
Biological.replicate.4.of.6..negative.control
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.3
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy3plogcy5slide581norm
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
Comments
Log in to post comments