Module 52 Residual: 0.50
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.50 | 0.0000000000005 | 4.5 | 81 | 23 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000005 | |
| Motif 2 |
 |
| e-value: 4.5 |
| MSMEG_6157 DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I) | MSMEG_4992 Uncharacterized protein |
| MSMEG_5374 Glutamate--ammonia ligase (L-glutamine synthetase) (EC 6.3.1.2) | MSMEG_6621 Bacterial luciferase family protein (Luciferase-like protein) |
| MSMEG_0929 ErfK/YbiS/YcfS/YnhG family protein (Lipoprotein lprQ) | MSMEG_1891 Uncharacterized protein |
| MSMEG_2576 Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) | MSMEG_0955 Uncharacterized protein |
| MSMEG_0928 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.3.1.98) (UDP-N-acetylmuramate dehydrogenase) | MSMEG_3067 Bifunctional riboflavin biosynthesis protein ribG : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase (Riboflavin biosynthesis protein RibD) (EC 1.1.1.193) (EC 3.5.4.26) |
| MSMEG_2578 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC 1.1.1.267) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) | MSMEG_3066 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) |
| MSMEG_2579 Zinc metalloprotease Rip1 (EC 3.4.24.-) (Regulator of sigma KLM proteases) (S2P endopeptidase) (Site-2-type intramembrane protease) (site-2 protease Rip1) (S2P protease Rip1) | MSMEG_3478 Tena/thi-4 family protein |
| MSMEG_3512 CinA-like protein | MSMEG_1582 10 kDa chaperonin (GroES protein) (Protein Cpn10) |
| MSMEG_4683 Putative DNA glycosylase Mb2491c (EC 4.2.99.18) (Putative formamidopyrimidine-DNA glycosylase) | MSMEG_1583 60 kDa chaperonin 2 (GroEL protein 2) (Protein Cpn60 2) |
| MSMEG_4684 Ribose 5-phosphate isomerase (EC 5.3.1.6) (Ribose-5-phosphate isomerase B) | MSMEG_3477 Cell wall-associated hydrolases (Invasion-associated proteins) (Possible inv protein) |
| MSMEG_4686 Putative oxidoreductase YdbC (EC 1.-.-.-) | MSMEG_4989 Sensor histidine kinase |
| MSMEG_4990 DNA-binding response regulator |
KO_stationary.phase_rep1
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
X4XR.rep1
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.5.of.6..kanamycin.treatment
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DamtR.N.surplus_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
Biological.replicate.3.of.6..kanamycin.treatment
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.4.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.vs.Dcrp1.replicate.1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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