Module 57 Residual: 0.49
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.49 | 0.0000005 | 38 | 74 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000005 | |
| Motif 2 |
 |
| e-value: 38 |
| MSMEG_3050 Integration host factor (Integration host factor MihF) | MSMEG_4521 Sulfonate ABC transporter periplasmic sulfonate-binding protein (Tat (Twin-arginine translocation) pathway signal sequence) |
| MSMEG_3051 Guanylate kinase (EC 2.7.4.8) (GMP kinase) | MSMEG_3360 Transcriptional regulator, TetR family (Transcriptional regulator, putative) |
| MSMEG_4782 Conserved hypothetical secreted protein (Uncharacterized protein) | MSMEG_2788 ATP/GTP-binding integral membrane protein |
| MSMEG_2179 Transcriptional regulator, TetR family (Transcriptional regulatory protein) | MSMEG_4667 Oxidative stress response regulatory protein Oxys (Transcriptional regulator, LysR family protein) |
| MSMEG_3997 Regulatory protein | MSMEG_0129 Cyclase/dehydrase family protein |
| MSMEG_4461 Conserved hypothetical integral membrane protein | MSMEG_6824 MarR-family protein regulatory protein |
| MSMEG_2750 Iron-dependent repressor IdeR (Iron-dependent repressor ideR) | MSMEG_2605 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) |
| MSMEG_0166 GntR-family protein transcriptional regulator | MSMEG_2606 ArsR-family protein transcriptional regulator |
| MSMEG_1947 Glutaredoxin-like protein (Uncharacterized protein) | MSMEG_3718 Uncharacterized protein |
| MSMEG_4523 Binding-protein-dependent transport systems inner membrane component | MSMEG_0184 Transferase |
| MSMEG_3049 Uncharacterized protein |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
dosR.WT_Replicate4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
X3dbfcy5plogcy3slide601norm
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep2.x
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DglnR.N_starvation_dye.swap_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
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