Module 60 Residual: 0.48
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.48 | 0.0000000018 | 0.0000000024 | 84 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000018 | |
| Motif 2 |
 |
| e-value: 0.0000000024 |
| MSMEG_2086 Peptide chain release factor 2 (RF-2) | MSMEG_3497 Transcriptional regulator, ArsR family protein |
| MSMEG_2087 MscS Mechanosensitive ion channel (Transporter, small conductance mechanosensitive ion channel (MscS) family protein) | MSMEG_3827 Glutamine synthetase |
| MSMEG_3542 Uncharacterized protein | MSMEG_3538 Cyclopropane-fatty-acyl-phospholipid synthase 1 (EC 2.1.1.79) |
| MSMEG_0519 Uncharacterized protein | MSMEG_4949 Release factor glutamine methyltransferase (RF MTase) (EC 2.1.1.297) (N5-glutamine methyltransferase PrmC) (Protein-(glutamine-N5) MTase PrmC) (Protein-glutamine N-methyltransferase PrmC) |
| MSMEG_3540 Uncharacterized protein | MSMEG_4948 SUA5/YciO/YrdC/YwlC (Sua5/YciO/YrdC/YwlC family protein) |
| MSMEG_4950 Peptide chain release factor 1 (RF-1) | MSMEG_4947 Decaprenyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.35) (Decaprenyl-phosphate GlcNAc-1-phosphate transferase) (Decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase) (UDP-GlcNAc:decaprenyl-phosphate GlcNAc-1-phosphate transferase) (UDP-N-acetylglucosamine--decaprenyl-phosphate N-acetylglucosaminephosphotransferase) |
| MSMEG_2259 Carbon starvation protein A (Carbon starvation protein CstA) | MSMEG_0562 Conserved integral membrane protein (Uncharacterized protein) |
| MSMEG_2023 CAIB/BAIF family protein (L-carnitine dehydratase/bile acid-inducible protein F) | MSMEG_0772 Phytase (Uncharacterized protein) |
| MSMEG_2024 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | MSMEG_0773 Acetyltransferase |
| MSMEG_3828 Glutamate-ammonia ligase (EC 6.3.1.2) (Glutamine synthetase) | MSMEG_2022 Gluconate permease (GntT protein, putative) |
| MSMEG_1124 4Fe-4S ferredoxin, iron-sulfur binding protein (Putative ferredoxin FdxA) | MSMEG_5987 Two-component regulator |
| MSMEG_1125 Regulatory protein, ArsR (Transcriptional regulator) | MSMEG_2258 Uncharacterized protein |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
WT.vs..DamtR.without.N_rep2
Wild.type.rep2.x
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
KO_log.phase_rep2
KO_log.phase_rep1
dosR.WT_Replicate4
Wild.type.rep1.x
DglnR_without.vs..with.N_rep1
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.2.of.7..ethambutol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
Sub.MIC.INH
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
Biological.replicate.5.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
dcpA.knockout.rep2
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
Biological.replicate.2.of.6..isoniazid.treatment
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
Biological.replicate.4.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Comments
Log in to post comments