Module 62 Residual: 0.59
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.59 | 4.1e-19 | 0.0000000076 | 82 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.1e-19 | |
| Motif 2 |
 |
| e-value: 0.0000000076 |
| MSMEG_0862 Molybdopterin biosynthesis protein MoeA | MSMEG_3770 Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase) |
| MSMEG_0863 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) | MSMEG_2099 ABC transporter, periplasmic substrate-binding protein (ABC transporter, substrate binding protein [nitrate/sulfonate], putative) |
| MSMEG_0864 Bacterial membrane flanked domain family protein | MSMEG_0378 Nitrile hydratase alpha subunit (Nitrile hydratase, alpha subunit) (EC 4.2.1.84) |
| MSMEG_4378 Putative two-component system response regulator, LuxR family (Two-component system response regulator) | MSMEG_6606 Uncharacterized protein |
| MSMEG_5268 Uncharacterized protein | MSMEG_2096 Integral membrane protein |
| MSMEG_4290 Glutamine synthetase 1 (EC 6.3.1.2) (Glutamate--ammonia ligase) | MSMEG_5315 Gp35 protein |
| MSMEG_0377 Nitrile hydratase (Nitrile hydratase subunit beta) (EC 4.2.1.84) | MSMEG_5317 Conserved membrane protein (Uncharacterized protein) |
| MSMEG_4680 Carboxylesterase, putative | MSMEG_4288 Integral membrane protein |
| MSMEG_0379 Nitrile hydratase activator P14k (Putative nitrile hydratase) (EC 4.2.1.84) | MSMEG_3024 NovD (Uncharacterized protein) |
| MSMEG_6816 Molybdopterin oxidoreductase (EC 1.2.1.2) | MSMEG_5231 Uncharacterized protein |
| MSMEG_4255 Uncharacterized protein | MSMEG_1391 Transcriptional regulator, LysR family protein |
| MSMEG_2196 Sensory box/response regulator (Uncharacterized protein) | MSMEG_1392 Alcohol dehydrogenase, class IV (Iron-containing alcohol dehydrogenase) (EC 1.1.1.1) |
| MSMEG_6598 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (LS) (Lumazine synthase) (EC 2.5.1.78) | MSMEG_1797 Salicylate esterase (EC 3.8.1.5) |
| MSMEG_4360 Putative secreted protein (Uncharacterized protein) | MSMEG_3769 Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase) |
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
Wild.type.rep2.y
Wild.type.rep1.y
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Slow.vs..Fast.Replicate.3
WT.vs..DamtR.N.surplus_rep2
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
Biological.replicate.2.of.7..falcarinol.treatment
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Bedaquiline.vs..DMSO.60min
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
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