Module 63 Residual: 0.25Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.25			75	22	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

MSMEG_2575 Putative conserved transmembrane protein (Uncharacterized protein)	MSMEG_5566 Transcriptional regulator
MSMEG_2577 Uncharacterized protein	MSMEG_3557 Amino acid permease-associated region
MSMEG_1744 Uncharacterized protein	MSMEG_3938 Uncharacterized protein
MSMEG_6455 Uncharacterized protein	MSMEG_1569 Uncharacterized protein

Conditions

Bedaquiline.vs..DMSO.30min

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.4.of.6..negative.control

WT.vs..DamtR.without.N_rep2

M..smegmatis.Acid.NO.treated

Mycobacterium.smegmatis.Spheroplast.induced

X4XR.rep1

Biological.replicate.1.of.6..negative.control

dosR.WT_Replicate2

dosR.WT_Replicate1

Wild.type.rep2.y

Wild.type.rep2.x

Wild.type.rep1.x

Biological.replicate.3.of.7..panaxydol.treatment

MB100pruR.vs..MB100.rep.2

WT.vs..DamtR.without.N_.dyeswap_rep2

MB100pruR.vs..MB100.rep.1

mc2155.vs.Dcrp1.replicate.3

Biological.replicate.1.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

rel.knockout.rep2

Wild.type.rep3

DamtR.with.vs..DamtR.without.N_.rep1

Biological.replicate.2.of.7..panaxydol.treatment

Biological.replicate.4.of.6..kanamycin.treatment

DamtR.with.vs..DamtR.without.N_.rep2

WT_log.phase_rep2

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.2

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

Slow.vs..Fast.Replicate.2

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

mc2155.vs.Dcrp1.replicate.2

Plogcy5plogcy3slide113norm

Biological.replicate.5.of.6..kanamycin.treatment

Biological.replicate.1.of.7..panaxydol.treatment

mc2155.vs.Dcrp1.replicate.4

Biological.replicate.5.of.7..panaxydol.treatment

stphcy5plogcy3slide580norm

X3dbfcy5plogcy3slide601norm

WT.with.vs..without.N_dye.swap_rep1

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.1

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

WT.with.vs..without.N_dye.swap_rep2

Biological.replicate.3.of.6..kanamycin.treatment

Biological.replicate.6.of.6..isoniazid.treatment

X4XR.rep2

Biological.replicate.5.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.4

WT.vs..DglnR.N_starvation_dye.swap_rep2

WT.vs..DglnR.N_starvation_dye.swap_rep1

Biological.replicate.6.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.3

Biological.replicate.5.of.6..negative.control

X3dbfcy5plogcy3slide603norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.with.vs..without.N_rep2

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.5.of.7..falcarinol.treatment

DglnR_without.vs..with.N_dyeswap_rep2

X2XR.rep1

X2XR.rep2

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

Biological.replicate.3.of.7..ethambutol.treatment

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

Sub.MIC.INH

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate3

BatchCulture_LBTbroth_StationaryPhase_Replicate1

Biological.replicate.2.of.6..kanamycin.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

Comments