Module 67 Residual: 0.44Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.44	3e-24	0.00000000019	87	24	20160204

Motifs

Motif 1
	e-value: 3e-24
Motif 2
	e-value: 0.00000000019

Module Plots

Members

MSMEG_2218 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17) (Enoyl-CoA hydratase/isomerase family protein)	MSMEG_2255 Carboxyl transferase domain protein (Propionyl-CoA carboxylase) (EC 6.4.1.3)
MSMEG_2237 Anaerobic dehydrogenase, typically	MSMEG_2257 Cytochrome P450 (Cytochrome P450-terp) (EC 1.14.-.-)
MSMEG_2236 Putative thiolase (Thiolase) (EC 2.3.1.176)	MSMEG_2256 Putative oxidoreductase/luciferase-like protein (EC 1.5.99.11) (Uncharacterized protein)
MSMEG_2234 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase, middle domain protein)	MSMEG_2219 Enoyl-CoA hydratase/isomerase (Enoyl-CoA hydratase/isomerase family protein)
MSMEG_2233 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase, C-domain protein)	MSMEG_2220 Enoyl-CoA hydratase/isomerase (EC 4.2.1.17)
MSMEG_4818 Cytochrome P450 (Putative cytochrome P450 123) (EC 1.14.-.-)	MSMEG_2221 Uncharacterized protein
MSMEG_2231 AMP-binding enzyme (Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase) (EC 2.3.1.86)	MSMEG_2222 Uncharacterized protein
MSMEG_2230 Amidohydrolase 2 (Amidohydrolase family protein)	MSMEG_2223 Enoyl-CoA hydratase/isomerase family protein
MSMEG_2215 AMP-binding enzyme (AMP-dependent synthetase and ligase)	MSMEG_2224 Acetyl-CoA C-acyltransferase
MSMEG_2217 AMP-dependent synthetase and ligase (EC 6.2.1.26)	MSMEG_2229 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17)
MSMEG_2216 AMP-binding enzyme	MSMEG_4819 Conserved domain protein (Uncharacterized protein)
MSMEG_2238 Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase (NAD) family protein) (EC 1.2.1.-)	MSMEG_2232 Amidohydrolase 2 (Amidohydrolase family protein)

Conditions

KO_stationary.phase_rep1

Wild.type.rep2.x

dcpA.knockout.rep2

Biological.replicate.1.of.7..falcarinol.treatment

DamtR.with.vs..DamtR.without.N_.rep1

DamtR.with.vs..DamtR.without.N_.rep2

stphcy5plogcy3slide580norm

X3dbfcy3plogcy5slide607norm

Biological.replicate.4.of.7..falcarinol.treatment

Biological.replicate.6.of.7..ethambutol.treatment

WT.vs..DamtR.without.N_rep2

Biological.replicate.4.of.6..negative.control

dosR.WT_Replicate3

Biological.replicate.2.of.7..panaxydol.treatment

Biological.replicate.7.of.7..falcarinol.treatment

Biological.replicate.3.of.7..panaxydol.treatment

Biological.replicate.6.of.6..negative.control

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.1.of.7..panaxydol.treatment

Biological.replicate.3.of.6..negative.control

WT_log.phase_rep1

WT.with.vs..without.N_dye.swap_rep1

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

Bedaquiline.vs..DMSO.60min

WT.vs..DglnR.N_starvation_dye.swap_rep1

rel.knockout.rep2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

WT.vs..DglnR.N_starvation_rep1

X2XR.rep1

X2XR.rep2

Sub.MIC.INH

Mycobacterium.smegmatis.Spheroplast.induced

Biological.replicate.3.of.6..isoniazid.treatment

DglnR_without.vs..with.N_rep1

DglnR_without.vs..with.N_rep2

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.6..kanamycin.treatment

rel.knockout.rep1

Biological.replicate.6.of.7..falcarinol.treatment

M..smegmatis.Acid.NO.treated

Biological.replicate.4.of.6..kanamycin.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2

Biological.replicate.5.of.6..kanamycin.treatment

WT_stationary.phase_rep2

Biological.replicate.2.of.6..isoniazid.treatment

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

BatchCulture_LBTbroth_ExponentialPhase_Replicate4

Plogcy5plogcy3slide113norm

Biological.replicate.2.of.6..negative.control

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

WT.with.vs..without.N_rep1

KO_log.phase_rep1

Wild.type.rep1.x

Wild.type.rep1.y

WT.vs..DamtR.without.N_.dyeswap_rep2

Biological.replicate.1.of.6..isoniazid.treatment

Biological.replicate.4.of.6..isoniazid.treatment

X0.6..vs..50..air.saturation.Replicate.1

X0.6..vs..50..air.saturation.Replicate.2

mc2155.vs.Dcrp1.replicate.3

mc2155.vs.Dcrp1.replicate.1

Biological.replicate.2.of.7..ethambutol.treatment

mc2155.vs.Dcrp1.replicate.4

BatchCulture_LBTbroth_StationaryPhase_Replicate3

Biological.replicate.5.of.7..panaxydol.treatment

dcpA.knockout.rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.2

X4XR.rep2

X4XR.rep1

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.5.of.6..isoniazid.treatment

Slow.vs..Fast.Replicate.2

Biological.replicate.5.of.6..negative.control

WT.vs..DamtR.N.surplus_.dyeswap_rep1

Biological.replicate.5.of.7..falcarinol.treatment

DglnR_without.vs..with.N_dyeswap_rep2

Biological.replicate.1.of.6..negative.control

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

BatchCulture_LBTbroth_StationaryPhase_Replicate2

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

Biological.replicate.2.of.6..kanamycin.treatment

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