Module 75 Residual: 0.46
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.46 | 8.50588e-43 | 0.0000000021 | 85 | 20 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 8.50588e-43 | |
| Motif 2 |
 |
| e-value: 0.0000000021 |
| MSMEG_2361 Phosphoribosylglycinamide formyltransferase (Phosphoribosylglycinamide formyltransferase protein) | MSMEG_5157 Uncharacterized protein |
| MSMEG_2360 4-coumarate CoA ligase (EC 6.2.1.12) (4-coumarate:CoA ligase) | MSMEG_5156 Base excision DNA repair protein, HhH-GPD family protein (EC 5.1.1.1) |
| MSMEG_5688 MarR-family transcriptional regulator (Regulatory protein, MarR) | MSMEG_2362 DNA ligase A (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)]) |
| MSMEG_5687 23s ribosomal RNA methyltransferase (tRNA/rRNA methyltransferase (SpoU)) | MSMEG_1273 Uncharacterized protein |
| MSMEG_1254 DEAD/DEAH box helicase (DEAD/DEAH box helicase-like protein) | MSMEG_1311 Oligopeptide transporter OPT (Oligopeptide transporter, OPT family protein) |
| MSMEG_1301 NanT3 | MSMEG_5186 HicB family protein |
| MSMEG_1251 Uncharacterized protein | MSMEG_1312 Uncharacterized protein |
| MSMEG_5689 Uncharacterized protein | MSMEG_1236 Mpr protein (Uncharacterized protein) |
| MSMEG_1253 Uncharacterized protein | MSMEG_1237 Uncharacterized protein |
| MSMEG_5690 Cyclase/dehydrase (Uncharacterized protein) | MSMEG_5187 Major facilitator superfamily MFS_1 (Tetracycline-resistance determinant TetV) |
KO_stationary.phase_rep1
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
Plogcy5plogcy3slide110norm
Biological.replicate.5.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
Biological.replicate.4.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DglnR_without.vs..with.N_rep1
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
dosR.WT_Replicate4
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.5.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.5.of.6..negative.control
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X4dbfcy5plogcy3slide480norm
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep1
Biological.replicate.1.of.7..ethambutol.treatment
X4XR.rep2
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Biological.replicate.3.of.7..panaxydol.treatment
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..kanamycin.treatment
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
WT.vs..DamtR.N.surplus_rep2
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