Module 81 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 4e-31 | 3.6 | 75 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4e-31 | |
| Motif 2 |
 |
| e-value: 3.6 |
| MSMEG_2831 Uncharacterized protein | MSMEG_5967 Glucose-methanol-choline oxidoreductase |
| MSMEG_2074 Alpha/beta hydrolase fold protein (Uncharacterized protein) | MSMEG_5602 Uncharacterized protein |
| MSMEG_3171 Uncharacterized protein | MSMEG_4679 Uncharacterized protein |
| MSMEG_6795 Enoyl-CoA hydratase/isomerase family protein | MSMEG_2075 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) |
| MSMEG_6772 Homoserine O-acetyltransferase (EC 2.3.1.-) (EC 2.3.1.31) | MSMEG_0674 ErfK/YbiS/YcfS/YnhG family protein |
| MSMEG_5307 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_6068 50S ribosomal protein L28 |
| MSMEG_5305 Choline dehydrogenase (EC 1.1.99.1) (Glucose-methanol-choline oxidoreductase) | MSMEG_6069 CobW/P47K C-domain protein |
| MSMEG_3447 Putative two-component system response regulator, LuxR family (Two-component system response regulator) | MSMEG_2071 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_6794 DNA-binding protein | MSMEG_2070 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Acyl-CoA dehydrogenase family protein) |
| MSMEG_3781 Uncharacterized protein | MSMEG_2073 CAIB/BAIF family protein (L-carnitine dehydratase/bile acid-inducible protein F) (EC 2.8.3.16) |
| MSMEG_2163 Aldehyde Dehydrogenase (EC 1.2.1.16) (Aldehyde dehydrogenase) | MSMEG_2072 3-hydroxy-3-methylglutaryl-CoA lyase (Hydroxymethylglutaryl-CoA lyase) (EC 4.1.3.4) |
| MSMEG_6052 ABC transport protein, ATP-binding subunit (Iron ABC transporter, ATP-binding protein) (EC 3.6.3.35) | MSMEG_4984 Uncharacterized protein |
| MSMEG_2068 Uncharacterized protein | MSMEG_6066 30S ribosomal protein S14 |
| MSMEG_2069 Phosphotransferase enzyme family protein | MSMEG_6067 50S ribosomal protein L33 2 |
| MSMEG_6811 Uncharacterized protein | MSMEG_6065 30S ribosomal protein S18 1 |
| MSMEG_2758 RNA polymerase sigma factor SigA |
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.4.of.6..negative.control
Wild.type.rep2.x
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..panaxydol.treatment
WT_log.phase_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
WT.with.vs..without.N_dye.swap_rep1
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.1.of.6..kanamycin.treatment
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