Module 84 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 1.4e-16 | 0.0000000044 | 86 | 23 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.4e-16 | |
| Motif 2 |
 |
| e-value: 0.0000000044 |
| MSMEG_6738 GntR-family transcriptional regulator (Probable transcriptional regulator YdhC) | MSMEG_3100 OpcA protein (Oxppcycle protein OpcA) |
| MSMEG_6739 Uncharacterized protein | MSMEG_3101 Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49) |
| MSMEG_6250 Glutamate--cysteine ligase EgtA (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (GCS) (Gamma-ECS) | MSMEG_3099 6-phosphogluconolactonase (EC 3.1.1.31) (6-phosphogluconolactonase DevB) (EC 3.1.1.31) |
| MSMEG_1669 Succinate dehydrogenase iron-sulfur protein subunit SdhB (EC 1.3.-.-) (Succinate dehydrogenase, iron-sulfur protein) (EC 1.3.99.1) | MSMEG_1672 Succinate dehydrogenase, cytochrome b556 subunit |
| MSMEG_2598 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) | MSMEG_6247 Histidine N-alpha-methyltransferase (EC 2.1.1.44) (Histidine trimethyltransferase) |
| MSMEG_2599 GntR family transcriptional regulator (GntR-family protein transcriptional regulator) | MSMEG_1670 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) |
| MSMEG_2596 Peptidase C26 (EC 4.1.3.27) | MSMEG_1671 Succinate dehydrogenase hydrophobic membrane anchor protein SdhD (EC 1.3.5.1) |
| MSMEG_2597 Aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde dehydrogenase AldC) (EC 1.2.1.-) | MSMEG_3103 Transketolase (EC 2.2.1.1) |
| MSMEG_2595 Gamma-glutamylisopropylamide synthetase (L-glutamine synthetase) (EC 6.3.1.2) | MSMEG_6248 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase (EC 3.5.1.118) (Gamma-glutamyl hercynylcysteine S-oxide hydrolase) |
| MSMEG_1673 Cytidine deaminase (EC 3.5.4.5) | MSMEG_6249 Hercynine oxygenase (EC 1.14.99.50) (Gamma-glutamyl hercynylcysteine S-oxide synthase) |
| MSMEG_3102 Transaldolase (EC 2.2.1.2) | MSMEG_4143 Uncharacterized protein |
| MSMEG_4142 Transcriptional repressor, TetR family protein, putative |
KO_stationary.phase_rep2
Biological.replicate.4.of.7..ethambutol.treatment
Wild.type.rep2.y
Wild.type.rep2.x
MB100pruR.vs..MB100.rep.4
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide487norm
stphcy5plogcy3slide580norm
X3dbfcy3plogcy5slide607norm
Biological.replicate.4.of.7..falcarinol.treatment
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
dosR.WT_Replicate2
dosR.WT_Replicate1
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.6.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
WT.vs..DglnR.N_starvation_dye.swap_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.3.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
WT.vs..DglnR.N_starvation_rep2
X2XR.rep2
Mycobacterium.smegmatis.Spheroplast.induced
MB100pruR.vs..MB100..rep.3
Slow.vs..Fast.Replicate.5
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
rel.knockout.rep2
Biological.replicate.6.of.7..falcarinol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.5.of.6..kanamycin.treatment
WT_stationary.phase_rep2
Biological.replicate.2.of.6..isoniazid.treatment
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
WT.vs..DamtR.N.surplus_.dyeswap_rep1
Plogcy5plogcy3slide113norm
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Wild.type.rep1.x
Wild.type.rep1.y
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.3.of.7..falcarinol.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.2.of.7..ethambutol.treatment
dcpA.knockout.rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.3
X4XR.rep2
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.3
Biological.replicate.5.of.6..negative.control
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
Biological.replicate.2.of.6..kanamycin.treatment
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