Module 86 Residual: 0.51
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.51 | 7.5 | 15 | 78 | 35 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 7.5 | |
| Motif 2 |
 |
| e-value: 15 |
| MSMEG_0865 Bacterial membrane flanked domain family protein (Membrane-flanked domain protein) | MSMEG_4349 Conserved hypothetical proline rich protein |
| MSMEG_4236 Transcriptional regulator MraZ | MSMEG_6143 Conserved transmembrane protein (Uncharacterized protein) |
| MSMEG_4468 Bacterial extracellular solute-binding protein UspC (Periplasmic sugar-binding lipoprotein UspC) | MSMEG_1988 Uncharacterized protein |
| MSMEG_6734 Dibenzothiophene desulfurization enzyme A (Putative desulfurization/monooxygenase) (EC 1.14.14.5) | MSMEG_1195 Uncharacterized protein |
| MSMEG_6443 DNA polymerase IV (Pol IV) (EC 2.7.7.7) | MSMEG_1194 Uncharacterized protein |
| MSMEG_4878 2Fe-2S iron-sulfur cluster binding domain protein (Ferredoxin) | MSMEG_4146 Quinone oxidoreductase (Zinc-binding alcohol dehydrogenase) (EC 1.6.5.5) |
| MSMEG_3449 DNA-binding protein | MSMEG_3455 Heat shock protein 15 |
| MSMEG_0719 Flavohemoprotein | MSMEG_3450 Haloacid dehalogenase, type II (EC 3.8.1.2) |
| MSMEG_0413 Uncharacterized protein | MSMEG_6319 Penicillin-binding protein (Penicillin-binding protein, transpeptidase) |
| MSMEG_4797 Uncharacterized protein | MSMEG_0717 Aldose 1-epimerase (Aldose 1-epimerase subfamily protein) |
| MSMEG_2690 DNA translocase FtsK | MSMEG_6208 Acyl-CoA thioesterase (EC 3.1.2.2) (Palmitoyl-CoA hydrolase) |
| MSMEG_2694 Transcriptional regulator ClgR | MSMEG_5845 Putative C4-dicarboxylate transporter (Uncharacterized protein) |
| MSMEG_4726 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | MSMEG_1110 Probable conserved transmembrane protein |
| MSMEG_4894 Uncharacterized protein | MSMEG_3620 Putative luciferase-like oxidoreductase (EC 1.5.99.11) (Uncharacterized protein) |
| MSMEG_4243 Serine/threonine-protein kinase PK-1 (EC 2.7.11.1) | MSMEG_2581 Acetyltransferase |
| MSMEG_2239 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_3810 Hydrolase |
| MSMEG_2592 Conserved hypothetical membrane protein (Uncharacterized protein) | MSMEG_4069 Uncharacterized protein |
| MSMEG_3297 Transcriptional regulator, CadC |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.3.of.7..falcarinol.treatment
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.4.of.6..isoniazid.treatment
dosR.WT_Replicate3
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_.dyeswap_rep1
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT_log.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
Plogcy5plogcy3slide113norm
Wild.type.rep2.y
X3dbfcy3plogcy5slide607norm
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
Wild.type.rep3
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
X2XR.rep1
Biological.replicate.5.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Bedaquiline.vs..DMSO.120min
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