Module 89 Residual: 0.61Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.61	0.000000024	0.26	78	14	20160204

Motifs

Motif 1
	e-value: 0.000000024
Motif 2
	e-value: 0.26

Module Plots

Members

MSMEG_6711 4-hydroxybenzoate transporter (General substrate transporter:Major facilitator superfamily MFS_1)	MSMEG_6239 1,3-propanediol dehydrogenase (EC 1.1.1.202)
MSMEG_4343 Uncharacterized protein	MSMEG_0966 Uncharacterized protein
MSMEG_4345 Uncharacterized protein	MSMEG_6181 Uncharacterized protein
MSMEG_2957 Uncharacterized protein	MSMEG_3956 Alkylhydroperoxidase AhpD
MSMEG_4347 Uncharacterized protein	MSMEG_0257 Acyl-CoA synthase (Fatty-acid-CoA ligase FadD4)
MSMEG_2958 Uncharacterized protein	MSMEG_3921 Uncharacterized protein
MSMEG_2004 Arabinose-proton symporter	MSMEG_6572 Methyltransferase

Conditions

KO_stationary.phase_rep1

Biological.replicate.5.of.7..falcarinol.treatment

WT.vs..DamtR.without.N_rep1

KO_log.phase_rep1

DamtR.with.vs..DamtR.without.N_.rep1

Biological.replicate.4.of.6..negative.control

Biological.replicate.2.of.6..isoniazid.treatment

Biological.replicate.1.of.6..negative.control

dosR.WT_Replicate3

dosR.WT_Replicate2

KO_log.phase_rep2

Wild.type.rep2.y

DglnR_without.vs..with.N_rep2

MB100pruR.vs..MB100.rep.2

Biological.replicate.2.of.7..panaxydol.treatment

mc2155.vs.Dcrp1.replicate.3

Bedaquiline.vs..DMSO.60min

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.7..falcarinol.treatment

Plogcy5plogcy3slide113norm

Biological.replicate.5.of.6..isoniazid.treatment

Biological.replicate.6.of.7..panaxydol.treatment

WT_log.phase_rep2

Biological.replicate.4.of.6..isoniazid.treatment

Biological.replicate.4.of.6..kanamycin.treatment

DamtR.with.vs..DamtR.without.N_.rep2

X3dbfcy5plogcy3slide601norm

X0.6..vs..50..air.saturation.Replicate.3

X0.6..vs..50..air.saturation.Replicate.2

X0.6..vs..50..air.saturation.Replicate.4

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3

mc2155.vs.Dcrp1.replicate.2

stphcy5plogcy3slide487norm

Biological.replicate.5.of.6..kanamycin.treatment

Biological.replicate.1.of.7..panaxydol.treatment

mc2155.vs.Dcrp1.replicate.4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

Biological.replicate.5.of.7..panaxydol.treatment

dcpA.knockout.rep1

X2.5..vs..50..air.saturation.Replicate.4

WT.with.vs..without.N_dye.swap_rep1

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

X2.5..vs..50..air.saturation.Replicate.1

X2.5..vs..50..air.saturation.Replicate.3

WT_stationary.phase_rep1

Biological.replicate.6.of.6..isoniazid.treatment

X4XR.rep2

Biological.replicate.5.of.7..ethambutol.treatment

Tet.CarD.vs.Control..Replicates.1..2..and.3.

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.1.of.7..ethambutol.treatment

WT.with.vs..without.N_dye.swap_rep2

Biological.replicate.4.of.7..falcarinol.treatment

Slow.vs..Fast.Replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate2

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X4dbfcy5plogcy3slide480norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

X4dbfcy5plogcy3slide901norm

WT.vs..DamtR.N.surplus_.dyeswap_rep1

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.3.of.6..kanamycin.treatment

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

X2XR.rep1

DglnR_without.vs..with.N_dyeswap_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate3

Biological.replicate.2.of.6..negative.control

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

Biological.replicate.3.of.6..negative.control

Biological.replicate.6.of.7..falcarinol.treatment

Bedaquiline.vs..DMSO.120min

Comments