Module 90 Residual: 0.46
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.46 | 0.000000037 | 0.000016 | 84 | 17 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000037 | |
| Motif 2 |
 |
| e-value: 0.000016 |
| MSMEG_3269 ABC transporter related protein (Putative sugar ABC transporter ATP-binding protein) | MSMEG_3605 Sorbitol dehydrogenase (EC 1.1.1.14) |
| MSMEG_3268 ABC transporter, permease protein (Binding-protein-dependent transport systems inner membrane component) | MSMEG_3604 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.-) (Sorbitol utilization protein SOU2) (EC 1.1.-.-) |
| MSMEG_3267 Binding-protein-dependent transport systems inner membrane component (Transporter) | MSMEG_3607 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.125) |
| MSMEG_3266 Extracellular solute-binding protein family 1 (Maltose/maltodextrin-binding protein) | MSMEG_3606 DeoR (Transcriptional regulator) (EC 2.7.1.29) (Transcriptional regulator) |
| MSMEG_3272 Ribose 5-phosphate isomerase (EC 5.3.1.6) | MSMEG_3601 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components (Sugar transport system permease protein) (EC 3.6.3.17) |
| MSMEG_3264 Transcriptional regulator (Transcriptional regulator, DeoR family) (EC 2.7.1.69) | MSMEG_3265 Alcohol dehydrogenase, zinc-binding protein (EC 1.1.1.-) (Arabitol-phosphate dehydrogenase) |
| MSMEG_3262 L-xylulose reductase (EC 1.1.1.10) | MSMEG_3603 Alcohol dehydrogenase GroES-like protein (EC 1.1.1.-) (Oxidoreductase, zinc-binding dehydrogenase family protein) |
| MSMEG_3270 SN-glycerol-3-phosphate ABC transporter, ATP-binding protein (Sugar ABC transporter, ATP-binding protein) | MSMEG_3602 Putative D-ribose ABC transporter ATP-binding protein (Ribose transport ATP-binding protein RbsA) (EC 3.6.3.17) |
| MSMEG_3271 Dihydroxyacetone kinase (Putative dihydroxyacetone (Glycerone) kinase protein) (EC 2.7.1.29) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
KO_log.phase_rep1
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
Biological.replicate.4.of.6..negative.control
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
Biological.replicate.3.of.6..isoniazid.treatment
Wild.type.rep2.y
Biological.replicate.7.of.7..falcarinol.treatment
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.2.of.7..panaxydol.treatment
Sub.MIC.INH
WT.vs..DglnR.N_starvation_dye.swap_rep1
DglnR_without.vs..with.N_rep1
Biological.replicate.3.of.7..ethambutol.treatment
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
Biological.replicate.5.of.6..negative.control
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.3.of.6..kanamycin.treatment
X4XR.rep2
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Bedaquiline.vs..DMSO.60min
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.4.of.6..kanamycin.treatment
Biological.replicate.3.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
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