Module 125 Residual: 0.61
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.61 | 5300 | 6700 | 75 | 31 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5300 | |
| Motif 2 |
 |
| e-value: 6700 |
| MSMEG_4463 CalR5 (CalR5 protein) | MSMEG_3533 Di-/tripeptide transporter |
| MSMEG_4464 Modulator of DNA gyrase (Peptidase U62 modulator of DNA gyrase) | MSMEG_4618 Isochorismatase family protein (Isochorismatase hydrolase) |
| MSMEG_5103 | MSMEG_6475 Uncharacterized protein |
| MSMEG_4239 LppM protein | MSMEG_1615 Gamma-glutamyltranspeptidase (EC 2.3.2.2) |
| MSMEG_4501 Sodium:dicarboxylate symporter (Sodium:dicarboxylate symporter: DAACS family) | MSMEG_5254 Uncharacterized protein |
| MSMEG_6017 Aminotransferase, class I | MSMEG_4690 Aminopeptidase G Metallo peptidase MEROPS family M01 (EC 3.4.11.2) (Aminopeptidase N) |
| MSMEG_4421 Uncharacterized protein | MSMEG_0209 Ribonuclease inhibitor (Uncharacterized protein) |
| MSMEG_3397 Acetylornithine deacetylase (Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase) (EC 3.5.1.16) | MSMEG_0563 Uncharacterized protein |
| MSMEG_4009 Vanillate O-demethylase oxidoreductase | MSMEG_2368 Transcriptional regulator, TetR family protein domain protein, putative |
| MSMEG_0535 GntR-family protein transcriptional regulator | MSMEG_5843 Uncharacterized protein |
| MSMEG_2553 Transcriptional regulator, TetR family protein | MSMEG_2689 Uncharacterized protein |
| MSMEG_4687 Cytosine deaminase (EC 3.5.4.1) | MSMEG_5286 Dihydrodipicolinate reductase (Dihydrodipicolinate reductase, N-terminus domain protein) (EC 1.17.1.8) |
| MSMEG_5850 Transcriptional regulator, TetR family protein | MSMEG_4884 Uncharacterized protein |
| MSMEG_3192 Uncharacterized protein | MSMEG_2448 Uncharacterized protein |
| MSMEG_1593 Uncharacterized protein | MSMEG_4314 Uncharacterized protein |
| MSMEG_6519 Pyridoxamine 5'-phosphate oxidase family protein (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
Biological.replicate.3.of.6..isoniazid.treatment
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..isoniazid.treatment
rel.knockout.rep1
Biological.replicate.6.of.6..negative.control
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_dyeswap_rep2
DamtR.with.vs..DamtR.without.N_.rep2
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep2
WT.vs..DamtR.N.surplus_rep1
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
Plogcy5plogcy3slide111norm
Biological.replicate.2.of.6..isoniazid.treatment
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.2
X2.5..vs..50..air.saturation.Replicate.3
Biological.replicate.2.of.6..negative.control
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.5.of.7..ethambutol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
dosR.WT_Replicate3
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
Slow.vs..Fast.Replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Bedaquiline.vs..DMSO.120min
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