Module 143 Residual: 0.46Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.46			76	11	20160204

Motifs

Motif 1

Motif 2

Module Plots

Members

MSMEG_6718 Major facilitator superfamily (MFS_1) transporter (Transporter, major facilitator family protein)	MSMEG_4679 Uncharacterized protein
MSMEG_6272 NAD-dependent glutamate dehydrogenase Gdh (EC 1.4.1.2) (NAD-glutamate dehydrogenase)	MSMEG_0267 Esterase
MSMEG_6628 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein)	MSMEG_6270 Uncharacterized protein
MSMEG_5220 Alpha/beta hydrolase fold-3 domain protein (Esterase/lipase/thioesterase)

Conditions

KO_stationary.phase_rep1

KO_stationary.phase_rep2

WT.vs..DglnR.N_starvation_rep2

Wild.type.rep2.y

WT.vs..DamtR.without.N_rep2

Biological.replicate.4.of.6..negative.control

Biological.replicate.4.of.7..ethambutol.treatment

X2XR.rep1

dosR.WT_Replicate3

dosR.WT_Replicate2

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Wild.type.rep2.x

Wild.type.rep1.x

Biological.replicate.3.of.7..panaxydol.treatment

MB100pruR.vs..MB100.rep.2

Biological.replicate.2.of.7..panaxydol.treatment

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.6..kanamycin.treatment

Bedaquiline.vs..DMSO..45min

Biological.replicate.4.of.7..falcarinol.treatment

Biological.replicate.6.of.7..falcarinol.treatment

Bedaquiline.vs..DMSO.15min

DamtR.with.vs..DamtR.without.N_.rep1

Biological.replicate.4.of.6..kanamycin.treatment

X0.6..vs..50..air.saturation.Replicate.1

WT_log.phase_rep2

X0.6..vs..50..air.saturation.Replicate.3

Sub.MIC.INH

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

X0.6..vs..50..air.saturation.Replicate.4

stphcy5plogcy3slide487norm

Biological.replicate.7.of.7..panaxydol.treatment

mc2155.vs.Dcrp1.replicate.4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4

Biological.replicate.5.of.6..kanamycin.treatment

dcpA.knockout.rep2

dcpA.knockout.rep1

stphcy5plogcy3slide580norm

X3dbfcy5plogcy3slide601norm

Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.

stphcy3plogcy5slide581norm

WT_log.phase_rep1

Biological.replicate.4.of.7..panaxydol.treatment

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

WT.with.vs..without.N_dye.swap_rep2

WT_stationary.phase_rep2

WT_stationary.phase_rep1

Biological.replicate.6.of.6..isoniazid.treatment

X4XR.rep2

X4XR.rep1

Slow.vs..Fast.Replicate.4

Slow.vs..Fast.Replicate.5

Biological.replicate.6.of.7..ethambutol.treatment

Slow.vs..Fast.Replicate.1

WT.vs..DglnR.N_starvation_dye.swap_rep2

Slow.vs..Fast.Replicate.3

BatchCulture_LBTbroth_ExponentialPhase_Replicate3

X4dbfcy5plogcy3slide480norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.2

X4dbfcy5plogcy3slide901norm

WT.with.vs..without.N_rep1

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.5.of.6..isoniazid.treatment

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

BatchCulture_LBTbroth_StationaryPhase_Replicate4

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate3

BatchCulture_LBTbroth_StationaryPhase_Replicate1

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2

Biological.replicate.3.of.6..negative.control

X4dbfcy3plogcy5slide903norm

WT.vs..DamtR.N.surplus_rep2

Bedaquiline.vs..DMSO.120min

Comments